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Answer: How to get DESeq2 results for a list of genes
by
ATpoint
★
1.3k
Standard rules of subsetting in R apply. If the genes are rownames then do `res_aga[my_genes,]`, like you would subset any data.frame/matri…
Answer: ComplexHeatmap: Change font size of annotation axis values
by
nalaspina
•
0
Someone on the original post was kind enough to provide the answer (in bold below):
row_ha = rowAnnotation(foo2 = runif(10), bar2 = anno…
Answer: setting sizeFactors from scran :: caculateSumFactors.
by
ATpoint
★
1.3k
You can conveniently convert your SingleCellExperiment to a DESeqDataSet, see https://bioconductor.org/packages/devel/bioc/vignettes/scran/…
Comment: Combine GRanges(List) to a single GRanges with unified breakpoints
by
Rodrigo
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0
@malcolm-cook-6293, thank you for your response, I'm working through your code as we speak.
Comment: package 'BiocInstaller' is not available (for R version 3.4.4)
by
James W. MacDonald
60k
I assume the politics have to do with the site-wide version of R? In over 20 years of using R, I have very rarely relied on an installation…
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