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Comment: BiocGenerics binary is outdated for macOS ARM by shepherl 3.5k
That is because it is failing from dependencies not being available. https://bioconductor.org/checkResults/3.17/bioc-mac-arm64-LATEST/BiocG…
Answer: Multitasking and Rbwa by James W. MacDonald 62k
There is no -t argument for bwa_build_index, so if that's what you are basing your question on, that's the reason. There is a -t argument f…
Comment: Recount3: PCR duplicates by ATpoint ★ 2.8k
The maintainers might answer specifically for recount3, but in general PCR (or any) duplication is not removed in RNA-seq (or targeted assa…
Comment: Normalized counts from LRT or Wald test? by sneha108ss • 0
That is great to know! Thank you
Comment: Installing densvis on a Singularity container by alan.ocallaghan ▴ 120
Do you have gfortran installed? eg [this installation package][1] [1]: https://github.com/fxcoudert/gfortran-for-macOS
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How to create "trait data" file for WGCNA
Comment: Visualization of negative log CPM values
Answer: Extracting fitted expression matrix from Limma
Answer: DESeq2 or edgeR for Presence and Absence of Proteins
Comment: Visualization of negative log CPM values
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