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Comment: Guitar R package requires update due to dependency GenomicFeatures
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Sean Davis
21k
A great way to communicate such a nice troubleshooting and bug fix hint is to file an issue in github: https://github.com/lzcyzm/Guitar/iss…
Answer: Converting Probe IDs to HGNC symbols
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Sean Davis
21k
The brainarray annotations are very confusing, as the IDs in the fData look like affymetrix probe IDs. To clarify, the brainarray project m…
Comment: How to do differential expresion across time serise with edgeR?
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Gordon Smyth
53k
If you have fake replicates, then I think my code answers your question about how to run the edgeR time-course analysis.
Regarding tutoria…
Comment: How to do differential expresion across time serise with edgeR?
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petergrahamclark
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10
The use case is kinetic model parameterisation. I'm actually a systems biologist not a bioinformatician. (which is why I'm struggling here)…
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