Biostar Prior_flowclust

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prior_flowclust openCyto

14 days ago martin.andres • 0

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Comment: Using Age or other numerical variable to model expression in deseq2 by krushnach80 • 0

yes in my metadata I checked its not turned into factor.. simple question what is the `intercept` in case of when I using age in my design …

Comment: Use of Scater for QC in scRNA-seq: How to remove cells with less than certain nu by ATpoint ★ 1.3k

x-posted: https://www.biostars.org/p/9528980/

Comment: RSEM - tximport; where is effective_length information used? Implications for sc by Michael Love 37k

It depends on the downstream tool, but the default pipelines in tximport or tximeta vignettes incorporate the effective length as a statist…

Comment: RSEM - tximport; where is effective_length information used? Implications for sc by Kelen • 0

Thanks @atpoint! The data is full-length, but regardless of this, the bits that confuse me (highlighted questions) are quite general I thin…

Comment: RSEM - tximport; where is effective_length information used? Implications for sc by Kelen • 0

Hi! Thank you both for the comments. It is indeed full-length (I have updated the question).

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