Bioconductor References

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deseq2 differential gene expression controls references

updated 23 hours ago by sofia.rigou • 0 • written 6.3 years ago by cris.kgs • 0

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ChAMP champ.DMP Cases Controls references

6.4 years ago yuabrahamliu • 0

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Comment: Ensembl site unresponsive via biomaRt by Mike Smith ★ 6.6k

I think this is an unrelated issue. The original post includes the message `Error: 'curl_parse_url' is not an exported object from 'namesp…

Comment: pairedGSEA input files by shdam ▴ 10

Hi Sara, Apologies for the slow response! James is exactly right. Both `salmon` and `kallisto` can produce transcript counts, if you map …

Comment: Unused arguments error without used arguments in GSVA? by michaelarringtony • 0

Perhaps from a direct call to gsva without the parameter [Sprunki Pyramixed][1] object [1]: https://pyramixed.io/

Comment: EdgeR Biological CVs by jeffreestary • 0

By default, edgeR uses an empirical Bayes approach to shrink gene-wise dispersions toward a trended or [PolyTrack][1] common value, which i…

Comment: How to reverse complement some elements of a DNAStringSet by shrill.asp.tufl • 0

Dealing with DNAStringSet manipulation can be tricky! When selectively reverse complementing sequences, consider how to efficiently retain …

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clusterProfiler-GO enrichment Error

A: Machine learning in R book

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