Bioconductor Rlmm

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hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens

updated 13.1 years ago by Nicholas Lewin-Koh ▴ 430 • written 13.1 years ago by Kurt Hornik ▴ 10

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SNP probe RLMM SNP probe RLMM

updated 18.2 years ago by Benilton Carvalho ★ 4.3k • written 18.2 years ago by Justin Borevitz ▴ 170

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GO Classification cdf affy RLMM GO Classification cdf affy RLMM

updated 18.3 years ago by Henrik Bengtsson ★ 2.4k • written 18.3 years ago by Amit Bahl ▴ 20

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Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data by Aaron Lun ★ 28k

You don't mention how your matrix data is being represented, but if it's a file-backed matrix (e.g., `HDF5Matrix` or one of its variants, b…

Comment: contrast matrix design for a continuous variable by dtzhu337 • 0

Thank you, Gordon. X is time splines for time point, and yes, it's needed. However, I was also thinking to incorporate time point with se…

Answer: contrast matrix design for a continuous variable by Gordon Smyth 52k

Yes, the design and contrasts are correct. Your analysis is also adjusted for covariates defined by X, which I assume is what you want to …

Comment: fail to use addPerROIQC in Rmd by liu.n • 0

That's odd. So it can run successfully within markdown but would be failed when knitting?

Comment: fail to use addPerROIQC in Rmd by joseph.joonsang • 0

> dim(spe) [1] 19962 425

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