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rmir
•
reset
0
votes
0
replies
757
views
RmiR and RmiR.Hs.miRNA
miRNA
RmiR
miRNA
RmiR
10.4 years ago
Thomas Hampton
▴ 750
0
votes
0
replies
885
views
BioC package for miRNA target scanning (or displaying results from databases)
miRNA
RmiR
miRNA
RmiR
11.9 years ago
James F.Reid
▴ 10
0
votes
0
replies
874
views
miRNA target prediction algorithm setting used in RmiR.Hs.miRNA package.
miRNA
RmiR
miRNA
RmiR
13.0 years ago
Paul Geeleher
★ 1.3k
0
votes
0
replies
827
views
RmiR: mapping miRNA to probe_id for Affy mogene10st
miRNA
Annotation
RmiR
miRNA
Annotation
RmiR
13.3 years ago
Mary Putt
▴ 100
0
votes
1
reply
877
views
Problem with createAnnObjs.HUMANCHIP_DB
hgug4112a
RmiR
hgug4112a
RmiR
updated 14.0 years ago by
Martin Morgan
25k • written 14.0 years ago by
Wendelin Waunzel
▴ 10
0
votes
0
replies
860
views
pair information of microRNA and Targets prediction
microRNA
RmiR
microRNA
RmiR
14.2 years ago
jrwang@itri.org.tw
▴ 60
6
votes
2
replies
973
views
pair information of microRNA and Targets prediction
microRNA
RmiR
microRNA
RmiR
updated 14.2 years ago by
Laurent Gautier
★ 2.3k • written 14.2 years ago by
jrwang@itri.org.tw
▴ 60
0
votes
0
replies
876
views
Questions on the package "RmiR"
miRNA
hgug4112a
RmiR
miRNA
hgug4112a
RmiR
14.3 years ago
jason0701
▴ 190
8 results • Page
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Answer: Once again a "Model matrix not full rank"
by
swbarnes2
★ 1.3k
Replicate numbers, like the 1 in control_1 are fine in sample names, but never add them to anything else in colData. From the computer's p…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
Gordon Smyth
50k
I'll add a little bit of general advice to James' answer. You seem to have the misunderstanding that you can change the design matrix but …
Answer: package goseq seems to be not available on the latest version of R
by
Gordon Smyth
50k
It is true that goseq isn't available for Bioc 3.19. That is because goseq depends on txbmaker, which is itself not yet available for Bioc…
Answer: limma Intercept vs No-intercept models completely changing DMR results?
by
James W. MacDonald
65k
This part: ``` design_intercept <- model.matrix(~Alt+Sex+Age+PC1, data=targets_Sherpa) colnames(design_intercept) <- c("AltSHP_LA","Al…
Comment: CombineArrays for EPIC and EPIC V2
by
Kim
• 0
Thank you Tim, this is a great help in getting me started!
Votes
Answer: limma Intercept vs No-intercept models completely changing DMR results?
Answer: CombineArrays for EPIC and EPIC V2
Answer: Too many significant genes when integrating gtex and tcga
Comment: Too many significant genes when integrating gtex and tcga
A: Print Differentially Expressed Exons From Dexseq Results
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