updated 8.3 years ago by
Habil Zare
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written 8.3 years ago by
benediktbrink
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8.3 years ago
Habil Zare
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Comment: Mixed up sample info with plotPCA
by
Michael Love
40k
Just as a note, if the sample info table had been named (that is `rownames(sampleInfo)` not `NULL`, DESeq2 would have been able to detect t…
Comment: Mixed up sample info with plotPCA
by
sara.jacobson
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0
You were correct. The order of my samples in my sample info-file did not match the order of the samples in my count data file. Thank you!
Answer: Delete all profiles
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shepherl
3.5k
Please send requests to webmaster@bioconductor.org providing more details like the full emails associated with the accounts. Thank you
Comment: Mixed up sample info with plotPCA
by
Michael Love
40k
Check colnames of count data.
I think you are providing these in different order to DESeq2.
Comment: Mixed up sample info with plotPCA
by
sara.jacobson
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0
Ok, thank you. This is everything from my session:
> library("ggplot2")
> library("dplyr")
Attaching package: 'dplyr'
…
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