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Comment: Rsamtools is not available for (for R version 4.0.2)
by
olinares-perdomo
• 0
I had the same problem (R 4.2.0) I used BiocManager::install("Rsamtools", force = TRUE) And it is working fine
Comment: Confused about the design matrix in edgeR: How to tell R to consider one level a
by
Gordon Smyth
45k
When I answered your original question, I assumed you would use the simplest possible code ``` Status <- factor(Sample_info$Status) ``` w…
Comment: Confused about the design matrix in edgeR: How to tell R to consider one level a
by
Mohamed
• 0
Thanks a lot, will try this and see.
Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a
by
Steve Lianoglou
13k
> My question is why the design matrix named its last column ' StatusControl' and not 'statustreated' ? It's because the Intercept is th…
Comment: Italicise
by
Kevin Blighe
3.5k
Hi, can you compare the contents of your variable, `lab_italics` , versus those of the variable (`selectLab_italics`) that is produced in m…
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Answer: Confused about the design matrix in edgeR: How to tell R to consider one level a
Answer: biomaRt error unable to fix: need help troubleshooting
Answer: edgeR : results from goana and kegga functions show opposite sig. p-value
Answer: paired analysis : return data matrix with indvidual/subject effects eliminated.
DESeq2: likelihood ratio test interpretation, multifactor
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