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seqLogo
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reset
1
vote
4
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925
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Error of PWM not colsum to 1 from package DiffLogo or seqLogo
seqLogo
DiffLogo
20 months ago
zhxiaokang
▴ 20
0
votes
1
reply
1.2k
views
PWM with columns that add up to 1
biostrings
seqlogo
pwm
updated 7.5 years ago by
Marcel Ramos
700 • written 7.5 years ago by
clausdkuhn
• 0
0
votes
5
replies
1.6k
views
Plotting protein position weighted matrices in seqLogo and DiffLogo
seqlogo
DiffLogo
updated 7.8 years ago by
mgledi
• 0 • written 7.8 years ago by
jeffb
• 0
0
votes
0
replies
783
views
Change chars ACGT to ACGU in seqLogo
seqLogo
seqLogo
10.5 years ago
Fabrice Tourre
▴ 970
0
votes
0
replies
800
views
cosmo for particular sequences
seqLogo
seqLogo
11.7 years ago
Guest User
★ 13k
0
votes
0
replies
1.3k
views
seqLogo package: sequence logo graph with background frequency?
seqLogo
seqLogo
12.4 years ago
Tim Smith
★ 1.1k
0
votes
3
replies
2.4k
views
Drawing multiple sequence logos with seqLogo?
graph
seqLogo
graph
seqLogo
13.7 years ago
Nenad Bartonicek
▴ 60
7 results • Page
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Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
JKim
• 0
The 1st model has an interaction term, but the 2nd model doesn't have the interaction term. That makes the difference.
Comment: Ensembl plants at annotationHub?
by
Daniele
• 0
Hi, I'm using Ensembl Plants release 59 with the IWGSC RefSeq v1.1 gene annotation. Thanks a lot for replying so quickly!
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
swbarnes2
★ 1.4k
If you restrict yourself to, say, genes with a baseMean > 50, are the numerical differences between the two designs significant?
Comment: DESeq2- Mysterious interaction suppresses DEGs
by
shaunpeterson
• 0
The images I tried to attach didn't attach. Here is the PCA (MDS) of all the samples, with the Cortex outlier highlighed. ![enter image de…
Comment: STRINGdb : error with string_db$plot_network()
by
damian.szk
▴ 80
ok. Forcing non-secure protocol should not be needed anymore, due to changes in the underlying library. However, I will look at why "HTTP" …
Votes
Answer: Error while installing BiocManager::install("org.Vdahliae.eg.db")
Comment: How can I create a eigencorplot of pca created from deseq2 object with PCAtools
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Answer: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
Rsubread counting peaks ATACseq
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