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sim
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2.1k
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parsing discrete colors in pathview KEGG
SIM
pathview
SIM
pathview
10.2 years ago
Luo Weijun
★ 1.6k
0
votes
0
replies
1.1k
views
Farms/Call.INI using oligo package?
probe
affy
oligo
SIM
farms
probe
affy
oligo
SIM
farms
10.5 years ago
Djork Clevert
▴ 210
0
votes
4
replies
3.2k
views
Pathview for global and overview maps Re: using pathview about hsa01100
Pathways
graph
PROcess
SIM
gage
pathview
Pathways
graph
PROcess
SIM
gage
pathview
updated 10.7 years ago by
Ed
▴ 230 • written 10.7 years ago by
Luo Weijun
★ 1.6k
0
votes
0
replies
978
views
SNP6.0 annotation
SNP
Annotation
probe
annotate
SIM
SNP
Annotation
probe
annotate
SIM
11.5 years ago
Guest User
★ 13k
0
votes
1
reply
1.5k
views
KEGGgraph bug
Pathways
Organism
SIM
KEGGgraph
Pathways
Organism
SIM
KEGGgraph
updated 14.4 years ago by
Marc Carlson
★ 7.2k • written 14.4 years ago by
Fraser Sim
▴ 270
0
votes
6
replies
1.5k
views
installation of Rgraphviz
Rgraphviz
SIM
Rgraphviz
SIM
updated 15.0 years ago by
Patrick Aboyoun
★ 1.6k • written 15.0 years ago by
ravi
▴ 130
0
votes
8
replies
1.6k
views
FW: Graphviz in Vista64
Rgraphviz
SIM
Rgraphviz
SIM
updated 15.2 years ago by
Martin Morgan
25k • written 15.2 years ago by
Sim, Fraser
▴ 350
0
votes
0
replies
1.5k
views
Cutoff to use for IQR filtering in genefilter
genefilter
affy
limma
GeneSpring
affylmGUI
GLAD
SIM
genefilter
affy
limma
GeneSpring
15.9 years ago
Mark Cowley
▴ 400
8 results • Page
1 of 1
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Answer: More regions in union when increasing DBA$config$mergeOverlap
by
Rory Stark
★ 5.2k
I think the documentation is out of sync with the code. Positive values represent gaps between intervals and negative values represent how …
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
Michael Love
41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds)
by
HAK
• 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM()
by
James W. MacDonald
65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Votes
Answer: DEseq2 coefficient
SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
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Rory Stark
★ 5.2k
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tangming2005
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Ian D.
▴ 70
Popular Question
to
junhui.li11
• 0
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to
James W. MacDonald
65k
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