Showing : tempO-seq • reset
2
votes
4
replies
1.4k
views
Extending limma to cover "non-linear" dose response models e.g. Hill, Exponential, etc...
limma dose-response lincs tempO-seq high-throughput transcriptomics
updated 5.6 years ago by 47k • written 5.6 years ago by ▴ 190
1 result • Page 1 of 1
Recent ...
Replies
Comment: Use with_go along with other filters in getBM function by RuBBiT0 ▴ 10
Thank you! I think that makes much sense to me.
Comment: Interpret plot from DiffBind by Rory Stark ★ 4.9k
Not necessarily. It look to me like there is reconfiguring going on, with some chromatin that was open in the control becoming closed (the …
Comment: Interpret plot from DiffBind by Chris • 0
Thanks Rory! So that means the diseased sample has chromatin more open then the control one, is that correct?
Answer: List of Deprecated Packages for Bioc3.17 by shepherl 3.5k
lfa and gcatest have been reinstated.
Comment: Remove duplicate genera in DEseq output? by Lluís Revilla Sancho ▴ 710
How is your data before calculating the deg_DESeq? I see you use `phyloseq_to_deseq2` which should work well, but have you double checked t…
Votes
Comment: Interpret plot from DiffBind
Answer: Use with_go along with other filters in getBM function
Answer: Use with_go along with other filters in getBM function
Answer: Interpret plot from DiffBind
A: Generating a proper TxDb instance from NCBI GFF Annotations File
Awards • All
Popular Question to Martin Morgan 25k
Teacher to deeenes ▴ 30
Popular Question to Hervé Pagès 16k
Popular Question to Gordon Smyth 47k
Teacher to James W. MacDonald 63k
Locations • All
United States, 3 minutes ago
United States/Austin Area, 3 minutes ago
Germany, 8 minutes ago
United States, 9 minutes ago
United States, 13 minutes ago
Traffic: 399 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6