Bioconductor Trigger

Showing : trigger • reset

vote

1.3k

views

trigger parallel processing multicore

updated 10.9 years ago by Valerie Obenchain ★ 6.8k • written 10.9 years ago by affennacken • 0

votes

replies

2.7k

views

RNASeq Cancer trigger RNASeq Cancer trigger

11.5 years ago Anna Esteve Codina ▴ 20

votes

replies

1.7k

views

Microarray impute PROcess convert mmgmos puma tigre trigger Microarray impute PROcess

updated 11.6 years ago by Solanki, Anisha ▴ 60 • written 11.6 years ago by Antti Honkela ▴ 50

votes

2.5k

views

Cancer GenomicRanges trigger Cancer GenomicRanges trigger

updated 12.0 years ago by Valerie Obenchain ★ 6.8k • written 12.0 years ago by Dan Du ▴ 210

votes

replies

1.2k

views

Proteomics trigger rTANDEM Proteomics trigger rTANDEM

12.7 years ago Frederic Fournier ▴ 40

votes

replies

1.6k

views

trigger trigger

updated 14.9 years ago by Michael Lawrence ★ 11k • written 14.9 years ago by Paul Shannon ★ 1.1k

votes

replies

1.5k

views

CGH trigger CGH trigger

updated 14.9 years ago by Steve Lianoglou ★ 13k • written 14.9 years ago by Noemi Andor ▴ 100

votes

replies

2.0k

views

affy affyio trigger affy affyio trigger

updated 17.3 years ago by cstrato ★ 3.9k • written 17.3 years ago by Germain Paimparay ▴ 10

votes

replies

1.1k

views

Annotation Cancer lumiMouseV1 lumi trigger Annotation Cancer lumiMouseV1 lumi trigger

18.3 years ago Simon Lin ▴ 270

votes

1.4k

views

GUI trigger GUI trigger

updated 20.4 years ago by stefano iacus ▴ 430 • written 20.4 years ago by David Williamson ▴ 10

votes

replies

1.2k

views

limma trigger limma trigger

20.5 years ago Pita ▴ 120

votes

1.3k

views

GUI trigger GUI trigger

updated 20.5 years ago by stefano iacus ▴ 430 • written 20.5 years ago by Betty Gilbert ▴ 50

votes

replies

1.5k

views

GUI trigger GUI trigger

updated 20.5 years ago by James W. MacDonald 68k • written 20.5 years ago by Betty Gilbert ▴ 50

votes

replies

1.5k

views

PROcess trigger PROcess trigger

updated 20.7 years ago by Peter Dalgaard ▴ 20 • written 20.7 years ago by Tae-Hoon Chung ▴ 180

votes

1.4k

views

cdf probe trigger cdf probe trigger

updated 22.8 years ago by rgentleman ★ 5.5k • written 22.8 years ago by Jens Vilstrup Johansen ▴ 20

15 results • Page 1 of 1

Recent ...

Replies

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I would like to clarify whether the command `res <- results(dds, name = "phaseLP.conditionTreated")` is the correct approach to generate …

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by James W. MacDonald 68k

Not sure I understand. You ask how to do something and then show how one would do so.

Comment: DiffBind getting Fold values of near 0 by littlefishes20 ▴ 10

Same issues. All peaks return to a fold near 0, although they are significant when visualizing in IGV. Please find the MAplot and volcanoPl…

Comment: How to account for solvent controls in DESeq2 when comparing follicular vs lutea by snijesh ▴ 200

I have checked DEGs between Solvent Control (SC) of FP and LP and there are noticebale differences in terms of DEGs. ``` # Checking SC in …

Answer: A0A287BB68 not recognized as UNPROT key in org.Ss.eg.db using AnnotationDbi::sel by James W. MacDonald 68k

Apparently it's been over-ridden by a different UniProtKB ID ``` > select(org.Ss.eg.db, "MYH11", "UNIPROT", "SYMBOL") 'select()' retu…

Votes

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

Can NanoString data be analyzed using DESeq2?

Awards • All

Popular Question to Robert Castelo ★ 3.4k