updated 3.2 years ago by
Gordon Smyth
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written 3.2 years ago by
dagsbio
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Comment: Error in DGEList(counts = cnt, group = group) : non-numeric values found in c
by
Luis
•
0
Thank you so much!
Comment: Error in DGEList(counts = cnt, group = group) : non-numeric values found in c
by
Luis
•
0
I understand, thank you very much for all the support and collaboration!
Answer: Normalized counts from LRT or Wald test?
by
ATpoint
★
2.8k
If the same samples are present in the object then the normalized counts are exactly the same independent of the design or test you use.
Comment: Visualization of negative log CPM values
by
Gordon Smyth
47k
Sorry, I was wrong to say that log2(TPM) is always negative, but log2(TPM) is not more likely that log2(CPM) to be positive if both are com…
Comment: Visualization of negative log CPM values
by
Sabiha
▴
10
@gordonsmyth Apologies, I used a wrong term, I would have mentioned raw `p-value` instead. Unfortunately, only 3 gene passed FDR (BH) in th…
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