Bioconductor VoomLmFit

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limma voomLmFit voomByGroup

updated 20 days ago by Gordon Smyth 53k • written 5 weeks ago by richardallenfriedmanbrooklyn ▴ 30

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edgeR limma voomLmFit

updated 6 months ago by Gordon Smyth 53k • written 6 months ago by Devin ▴ 10

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limma duplicateCorrelation edgeR modelMatrixMeth voomLmFit

11 months ago altintas.ali • 0

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edgeR voomLmFit limma duplicateCorrelation voom

updated 11 months ago by Gordon Smyth 53k • written 3.8 years ago by altintas.ali • 0

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Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design by abaed • 0

Hello again @gordonsmyth, I've now applied the analysis using a more detailed annotation of cell types/clusters, which includes about 100 …

Answer: Sharing a collection of datasets in ExperimentHub by shepherl 4.2k

107 packages would be a lot! It is certainly possible (and recommended) to implement one package that utilizes ExperimentHub for controlli…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…

Comment: GO.db and others package Download failure by James W. MacDonald 68k

Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …

Comment: GO.db and others package Download failure by Skyler • 0

Am I using Bioc-devel?

Votes

Comment: readDNAStringSet with non DNA characters

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design

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