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Comment: Manual creation of qPCRset does not work by Ed Siefker ▴ 230

Thanks! This works for me.

Answer: Manual creation of qPCRset does not work by James W. MacDonald 63k

``` > mat <- matrix(rnorm(6*96), ncol = 6, nrow = 96, byrow = FALSE) > pd <- new("AnnotatedDataFrame", data = data.frame(1:6, row.names …

Answer: ukb Chromosomal position information was converted into SNPS by James W. MacDonald 63k

In my work, we almost always convert RSIDs to chr:pos because the former is ambiguous and changing whereas the latter is not. Which is like…

Comment: T.fit function of maSigPro returns error message by hanna.g • 0

Addition to the issue above: the T.fit function works only when choosing the step.method = "forward", for whatever reason. Maybe this clue …

Answer: Deseq2, enrichGO and ensembl ID by James W. MacDonald 63k

1. There isn't a keytype alternative. You need the gene IDs. 2. Convert the `rownames` of your 'se' object, or the `rownames` of your `D…

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Answer: Manual creation of qPCRset does not work

Answer: MDS plot edgeR

A: legend with gradient in ComplexHeatmap

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Popular Question to Ed Siefker ▴ 230

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