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64
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cnvEQTL : Error in cpm.default(y, lib.size = lib.size) : NA counts not allowed
CNVRanger
4 weeks ago
xiaofeiwang18266
▴ 50
2
votes
1
reply
568
views
Error in download.file for TCGAutils::symbolsToRanges
TCGAutils
updated 5 weeks ago by
James W. MacDonald
68k • written 5 weeks ago by
xiaofeiwang18266
▴ 50
0
votes
0
replies
784
views
Comment:
Comment: how to add annotation on individual track
21 months ago
xiaofeiwang18266
▴ 50
0
votes
2
replies
784
views
how to add annotation on individual track
Gviz
updated 21 months ago by
Robert Ivanek
▴ 750 • written 21 months ago by
xiaofeiwang18266
▴ 50
0
votes
1
reply
2.1k
views
Comment:
Comment: RUVseq, DESeq2, and different codesets for nanostring data
2.7 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
2.1k
views
Comment:
Comment: RUVseq, DESeq2, and different codesets for nanostring data
2.7 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
2.1k
views
Comment:
Comment: RUVseq, DESeq2, and different codesets for nanostring data
2.7 years ago
xiaofeiwang18266
▴ 50
1
vote
7
replies
2.1k
views
RUVseq, DESeq2, and different codesets for nanostring data
RUVSeq
DESeq2
updated 2.7 years ago by
Michael Love
43k • written 2.7 years ago by
xiaofeiwang18266
▴ 50
0
votes
0
replies
7.0k
views
Comment:
Comment: DESEq2: Two factor design without interaction
2.9 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
7.0k
views
Comment:
Comment: DESEq2: Two factor design without interaction
2.9 years ago
xiaofeiwang18266
▴ 50
0
votes
0
replies
9.6k
views
Comment:
Comment: what the test method for enrichGO in clusterProfiler?
3.2 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
9.6k
views
Comment:
Comment: what the test method for enrichGO in clusterProfiler?
3.2 years ago
xiaofeiwang18266
▴ 50
5
votes
4
replies
9.6k
views
what the test method for enrichGO in clusterProfiler?
clusterProfiler
3.2 years ago
xiaofeiwang18266
▴ 50
0
votes
0
replies
3.0k
views
Comment:
Comment: extract TCGA barcodes and sample_type information from uuids
3.5 years ago
xiaofeiwang18266
▴ 50
0
votes
0
replies
1.7k
views
Comment:
Comment: 2 questions: why there is nothing for file_ids? How could I generate a manifest
3.5 years ago
xiaofeiwang18266
▴ 50
1
vote
1
reply
1.7k
views
Comment:
Comment: 2 questions: why there is nothing for file_ids? How could I generate a manifest
3.5 years ago
xiaofeiwang18266
▴ 50
4
votes
4
replies
1.7k
views
2 questions: why there is nothing for file_ids? How could I generate a manifest file with filtering of Race and Ethnicity?
GenomicDataCommons
3.5 years ago
xiaofeiwang18266
▴ 50
0
votes
0
replies
2.2k
views
Comment:
Comment: how to plot multiple RLEs on same plot?
3.7 years ago
xiaofeiwang18266
▴ 50
0
votes
2
replies
2.2k
views
Comment:
Comment: how to plot multiple RLEs on same plot?
3.7 years ago
xiaofeiwang18266
▴ 50
1
vote
5
replies
2.2k
views
how to plot multiple RLEs on same plot?
plotRLE
Nanostring
RUVSeq
DESEQ2
updated 6 months ago by
BioinfGuru
▴ 70 • written 3.7 years ago by
xiaofeiwang18266
▴ 50
0
votes
1
reply
11k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
3.7 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
11k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
3.7 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
11k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
3.7 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
11k
views
Comment:
Comment: Can NanoString data be analyzed using DESeq2?
3.7 years ago
xiaofeiwang18266
▴ 50
0
votes
0
replies
1.2k
views
Comment:
Comment: discrepancy in number of samples
3.8 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
1.2k
views
Comment:
Comment: discrepancy in number of samples
3.9 years ago
xiaofeiwang18266
▴ 50
0
votes
3
replies
1.2k
views
discrepancy in number of samples
TCGAquery_recount2
TCGAbiolinks
3.9 years ago • updated 3.8 years ago
xiaofeiwang18266
▴ 50
1
vote
1
reply
1.7k
views
Does DESeq2 need "scale_counts" for GTEx and TCGA data from recount2 (TCGAquery_recount2)?
TCGAbiolinks
RECOUNT2
DESeq2
updated 3.9 years ago by
Michael Love
43k • written 3.9 years ago by
xiaofeiwang18266
▴ 50
0
votes
0
replies
4.1k
views
Comment:
Comment: error reading from connection (Error in load(url(con)))
3.9 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
4.1k
views
Comment:
Comment: error reading from connection (Error in load(url(con)))
3.9 years ago
xiaofeiwang18266
▴ 50
1
vote
0
replies
4.1k
views
Comment:
Comment: error reading from connection (Error in load(url(con)))
3.9 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
4.1k
views
Comment:
Comment: error reading from connection (Error in load(url(con)))
3.9 years ago
xiaofeiwang18266
▴ 50
1
vote
0
replies
4.1k
views
Comment:
Comment: error reading from connection (Error in load(url(con)))
3.9 years ago
xiaofeiwang18266
▴ 50
3
votes
8
replies
4.1k
views
error reading from connection (Error in load(url(con)))
TCGAbiolinks
3.9 years ago
xiaofeiwang18266
▴ 50
6
votes
5
replies
1.5k
views
perform DESeq2 based on paired sample
DESeq2
4.0 years ago
xiaofeiwang18266
▴ 50
0
votes
0
replies
1.5k
views
Answer:
Answer: perform DESeq2 based on paired sample
4.0 years ago
xiaofeiwang18266
▴ 50
0
votes
1
reply
1.5k
views
Comment:
Answer: perform DESeq2 based on paired sample
4.0 years ago
xiaofeiwang18266
▴ 50
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