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cnvEQTL : Error in cpm.default(y, lib.size = lib.size) : NA counts not allowed
CNVRanger
10 months ago xiaofeiwang18266 ▴ 60
2
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1
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749
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Error in download.file for TCGAutils::symbolsToRanges
TCGAutils
updated 10 months ago by 68k • written 10 months ago by ▴ 60
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Comment: Comment: how to add annotation on individual track
2.5 years ago xiaofeiwang18266 ▴ 60
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2
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969
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how to add annotation on individual track
Gviz
updated 2.5 years ago by ▴ 750 • written 2.5 years ago by ▴ 60
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2.5k
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Comment: Comment: RUVseq, DESeq2, and different codesets for nanostring data
3.4 years ago xiaofeiwang18266 ▴ 60
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2.5k
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Comment: Comment: RUVseq, DESeq2, and different codesets for nanostring data
3.4 years ago xiaofeiwang18266 ▴ 60
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1
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2.5k
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Comment: Comment: RUVseq, DESeq2, and different codesets for nanostring data
3.4 years ago xiaofeiwang18266 ▴ 60
1
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7
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2.5k
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RUVseq, DESeq2, and different codesets for nanostring data
RUVSeq DESeq2
updated 3.4 years ago by 43k • written 3.4 years ago by ▴ 60
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7.3k
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Comment: Comment: DESEq2: Two factor design without interaction
3.6 years ago xiaofeiwang18266 ▴ 60
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7.3k
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Comment: Comment: DESEq2: Two factor design without interaction
3.6 years ago xiaofeiwang18266 ▴ 60
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11k
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Comment: Comment: what the test method for enrichGO in clusterProfiler?
3.9 years ago xiaofeiwang18266 ▴ 60
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1
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11k
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Comment: Comment: what the test method for enrichGO in clusterProfiler?
3.9 years ago xiaofeiwang18266 ▴ 60
6
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4
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11k
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what the test method for enrichGO in clusterProfiler?
clusterProfiler
3.9 years ago xiaofeiwang18266 ▴ 60
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3.6k
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Comment: Comment: extract TCGA barcodes and sample_type information from uuids
4.2 years ago xiaofeiwang18266 ▴ 60
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2.2k
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Comment: Comment: 2 questions: why there is nothing for file_ids? How could I generate a manifest
4.2 years ago xiaofeiwang18266 ▴ 60
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1
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2.2k
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Comment: Comment: 2 questions: why there is nothing for file_ids? How could I generate a manifest
4.3 years ago xiaofeiwang18266 ▴ 60
4
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4
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2.2k
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2 questions: why there is nothing for file_ids? How could I generate a manifest file with filtering of Race and Ethnicity?
GenomicDataCommons
4.3 years ago • updated 4.2 years ago xiaofeiwang18266 ▴ 60
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2.6k
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Comment: Comment: how to plot multiple RLEs on same plot?
4.4 years ago xiaofeiwang18266 ▴ 60
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2
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2.6k
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Comment: Comment: how to plot multiple RLEs on same plot?
4.4 years ago xiaofeiwang18266 ▴ 60
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5
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2.6k
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how to plot multiple RLEs on same plot?
plotRLE Nanostring RUVSeq DESEQ2
updated 15 months ago by ▴ 70 • written 4.4 years ago by ▴ 60
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13k
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Comment: Comment: Can NanoString data be analyzed using DESeq2?
4.5 years ago xiaofeiwang18266 ▴ 60
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1
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13k
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Comment: Comment: Can NanoString data be analyzed using DESeq2?
4.5 years ago xiaofeiwang18266 ▴ 60
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1
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13k
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Comment: Comment: Can NanoString data be analyzed using DESeq2?
4.5 years ago xiaofeiwang18266 ▴ 60
0
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1
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13k
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Comment: Comment: Can NanoString data be analyzed using DESeq2?
4.5 years ago xiaofeiwang18266 ▴ 60
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0
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1.5k
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Comment: Comment: discrepancy in number of samples
4.6 years ago xiaofeiwang18266 ▴ 60
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1
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1.5k
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Comment: Comment: discrepancy in number of samples
4.6 years ago xiaofeiwang18266 ▴ 60
0
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3
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1.5k
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discrepancy in number of samples
TCGAquery_recount2 TCGAbiolinks
4.6 years ago xiaofeiwang18266 ▴ 60
1
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1
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1.9k
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Does DESeq2 need "scale_counts" for GTEx and TCGA data from recount2 (TCGAquery_recount2)?
TCGAbiolinks RECOUNT2 DESeq2
updated 4.6 years ago by 43k • written 4.6 years ago by ▴ 60
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4.7k
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Comment: Comment: error reading from connection (Error in load(url(con)))
4.6 years ago xiaofeiwang18266 ▴ 60
0
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1
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4.7k
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Comment: Comment: error reading from connection (Error in load(url(con)))
4.6 years ago xiaofeiwang18266 ▴ 60
1
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0
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4.7k
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Comment: Comment: error reading from connection (Error in load(url(con)))
4.6 years ago xiaofeiwang18266 ▴ 60
0
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1
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4.7k
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Comment: Comment: error reading from connection (Error in load(url(con)))
4.6 years ago xiaofeiwang18266 ▴ 60
1
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0
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4.7k
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Comment: Comment: error reading from connection (Error in load(url(con)))
4.6 years ago xiaofeiwang18266 ▴ 60
3
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8
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4.7k
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error reading from connection (Error in load(url(con)))
TCGAbiolinks
4.6 years ago xiaofeiwang18266 ▴ 60
6
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5
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1.7k
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perform DESeq2 based on paired sample
DESeq2
4.8 years ago xiaofeiwang18266 ▴ 60
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0
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1.7k
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Answer: Answer: perform DESeq2 based on paired sample
4.8 years ago xiaofeiwang18266 ▴ 60
0
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1
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1.7k
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Comment: Answer: perform DESeq2 based on paired sample
4.8 years ago xiaofeiwang18266 ▴ 60
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