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Comment: Comment: Batch effect between biological replicates
2.4 years ago gtechbio ▴ 10
1
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2
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1.7k
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Batch effect between biological replicates
BatchEffect DESeq2
2.4 years ago gtechbio ▴ 10
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1
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2.6k
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Comment: Comment: DESeq2 Error in checkContrast(contrast, resNames) : when using list()
3.1 years ago gtechbio ▴ 10
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1
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2.6k
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Comment: Comment: DESeq2 Error in checkContrast(contrast, resNames) : when using list()
3.1 years ago gtechbio ▴ 10
0
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1
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2.6k
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Comment: Comment: DESeq2 Error in checkContrast(contrast, resNames) : when using list()
3.1 years ago gtechbio ▴ 10
0
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7
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2.6k
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DESeq2 Error in checkContrast(contrast, resNames) : when using list()
DESeq2
updated 3.1 years ago by 43k • written 3.1 years ago by ▴ 10
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1.4k
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Comment: Comment: Time course RNA seq with DESeq2
3.1 years ago gtechbio ▴ 10
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1
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730
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DESeq2 analysis with 3 factors
DESeq2
updated 3.1 years ago by 43k • written 3.1 years ago by ▴ 10
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1
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1.2k
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Comment: C: collapseReplicates changes the order of the original dataframe in DESeq2
6.2 years ago gtechbio ▴ 10
2
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3
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1.2k
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collapseReplicates changes the order of the original dataframe in DESeq2
deseq2 collapseReplicates
updated 6.2 years ago by 43k • written 6.2 years ago by ▴ 10
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0
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1.1k
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Comment: C: using DESeq2 v 1.18 in Bioconductor v. 3.8
6.5 years ago gtechbio ▴ 10
1
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2
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1.1k
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using DESeq2 v 1.18 in Bioconductor v. 3.8
deseq2 bioconductor
updated 6.5 years ago by 4.2k • written 6.5 years ago by ▴ 10
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0
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1.0k
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removing confounding batch efffect with RUVg
RUVg RNAseq batch effect
6.5 years ago gtechbio ▴ 10
0
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1
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1.2k
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Comment: C: Accounting for batch effect in DESseq2
6.5 years ago gtechbio ▴ 10
0
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1
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1.2k
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Comment: C: Accounting for batch effect in DESseq2
6.5 years ago gtechbio ▴ 10
3
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5
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1.2k
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Accounting for batch effect in DESseq2
deseq2 batch_effect
updated 6.5 years ago by 43k • written 6.5 years ago by ▴ 10
0
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0
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1.9k
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Comment: C: DiffBind confuses coordinates of peaks
7.0 years ago gtechbio ▴ 10
2
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4
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1.9k
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DiffBind confuses coordinates of peaks
atacseq diffbind
updated 7.0 years ago by ★ 5.2k • written 7.0 years ago by ▴ 10
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0
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1.9k
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Comment: C: DiffBind confuses coordinates of peaks
7.0 years ago gtechbio ▴ 10
0
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1
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1.7k
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Comment: C: Allele-specific expression with different gene lenghts
7.4 years ago gtechbio ▴ 10
0
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1
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1.7k
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Comment: C: Allele-specific expression with different gene lenghts
7.4 years ago gtechbio ▴ 10
0
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1
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1.7k
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Comment: C: Allele-specific expression with different gene lenghts
7.4 years ago gtechbio ▴ 10
0
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0
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1.7k
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Comment: C: Allele-specific expression with different gene lenghts
7.4 years ago gtechbio ▴ 10
0
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1
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1.7k
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Comment: C: Allele-specific expression with different gene lenghts
7.4 years ago gtechbio ▴ 10
1
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10
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1.7k
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Allele-specific expression with different gene lenghts
deseq2 allele-specific-expression rnaseq
updated 7.4 years ago by 43k • written 7.4 years ago by ▴ 10
0
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1
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1.8k
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Comment: C: Time course DE analysis in DESeq2 with Wald test
7.9 years ago gtechbio ▴ 10
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1
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1.8k
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Comment: C: Time course DE analysis in DESeq2 with Wald test
7.9 years ago gtechbio ▴ 10
1
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5
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1.8k
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Time course DE analysis in DESeq2 with Wald test
DESeq2 time-series
updated 7.9 years ago by 43k • written 7.9 years ago by ▴ 10
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1
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1.4k
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Comment: C: DESeq2 for ASE
8.0 years ago gtechbio ▴ 10
1
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3
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1.4k
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DESeq2 for ASE
DESEQ2 ASE diploid-genome
updated 8.0 years ago by 43k • written 8.0 years ago by ▴ 10
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