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question regarding RMA on 2 different U133 platforms
probe probe
updated 14.2 years ago by 68k • written 14.2 years ago by ▴ 820
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3
replies
1.4k
views
question about data analysis of Genechip miRNA
miRNA miRNA
updated 14.8 years ago by ★ 4.1k • written 14.8 years ago by ▴ 820
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7
replies
1.4k
views
question regarding MAS5 normalization with reduced probes
cdf cdf
updated 15.2 years ago by 68k • written 15.2 years ago by ▴ 820
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0
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1.4k
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Comment: C: question regarding MAS5 normalization with reduced probes
15.2 years ago James Anderson ▴ 820
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1
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1.4k
views
Comment: C: question regarding MAS5 normalization with reduced probes
15.2 years ago James Anderson ▴ 820
0
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1
reply
1.4k
views
Comment: C: question regarding MAS5 normalization with reduced probes
15.2 years ago James Anderson ▴ 820
0
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0
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1.3k
views
Comment: C: how to do probe set mapping between U133A and Gene 1.0 ST array
15.3 years ago James Anderson ▴ 820
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2
replies
1.3k
views
how to do probe set mapping between U133A and Gene 1.0 ST array
probe probe
updated 15.3 years ago by 68k • written 15.3 years ago by ▴ 820
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0
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604
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how to find out whether some Affy probe sets are Alu contaminated?
probe probe
15.3 years ago James Anderson ▴ 820
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0
replies
1.1k
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Comment: C: question about qc function in SimpleAffy package with U95Av2 array
15.4 years ago James Anderson ▴ 820
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2
replies
1.1k
views
question about qc function in SimpleAffy package with U95Av2 array
cdf cdf
updated 15.5 years ago by 6.7k • written 15.5 years ago by ▴ 820
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3
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1.5k
views
how to find the list of probe sets in Affy U133A that correspond to housekeeping genes
Normalization probe affy Normalization probe affy
updated 15.6 years ago by ★ 7.2k • written 15.6 years ago by ▴ 820
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2
replies
1.2k
views
how to find the probe set ID using different CDF file?
cdf probe affy cdf probe affy
updated 15.6 years ago by ▴ 630 • written 15.6 years ago by ▴ 820
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0
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1.2k
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question regarding qc function in simpleaffy package
cdf affy simpleaffy cdf affy simpleaffy
15.6 years ago James Anderson ▴ 820
0
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2
replies
1.3k
views
what is the website to get gene name from Affy probe set ID?
probe affy probe affy
updated 15.6 years ago by ▴ 220 • written 15.7 years ago by ▴ 820
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1
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1.0k
views
questions regarding simpleaffy and justMAS
Normalization affy Normalization affy
updated 15.6 years ago by 68k • written 15.6 years ago by ▴ 820
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0
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977
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question about QC and Simpleaffy package
simpleaffy simpleaffy
15.8 years ago James Anderson ▴ 820
0
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1
reply
2.0k
views
Comment: C: question about RMA normalized gene expression values
15.8 years ago James Anderson ▴ 820
0
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4
replies
2.0k
views
question about RMA normalized gene expression values
Normalization probe Normalization probe
updated 15.8 years ago by 68k • written 15.8 years ago by ▴ 820
0
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1
reply
721
views
silly question on how to get the expression value
updated 17.8 years ago by ▴ 90 • written 17.8 years ago by ▴ 820
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8
replies
992
views
installation of affycoretools
updated 17.9 years ago by 25k • written 17.9 years ago by ▴ 820
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0
replies
992
views
Comment: C: installation of affycoretools
17.9 years ago James Anderson ▴ 820
0
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1
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992
views
Comment: C: installation of affycoretools
17.9 years ago James Anderson ▴ 820
0
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2
replies
522
views
justMAS function not found
updated 17.9 years ago by 16k • written 17.9 years ago by ▴ 820
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1
reply
884
views
Comment: C: about microarray batch effect and treatment effect
17.9 years ago James Anderson ▴ 820
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3
replies
884
views
about microarray batch effect and treatment effect
updated 17.9 years ago by 21k • written 17.9 years ago by ▴ 820
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0
replies
358
views
question on lars package
17.9 years ago James Anderson ▴ 820
0
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1
reply
843
views
about a lymphoma dataset
updated 17.9 years ago by ★ 13k • written 17.9 years ago by ▴ 820
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1
reply
856
views
question regarding .632plus error rate estimator in ipred package
updated 18.0 years ago by ▴ 70 • written 18.0 years ago by ▴ 820
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0
replies
2.9k
views
Comment: C: warning message in KS test
18.0 years ago James Anderson ▴ 820
0
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1
reply
2.9k
views
Comment: C: warning message in KS test
18.0 years ago James Anderson ▴ 820
0
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1
reply
2.9k
views
Comment: C: warning message in KS test
18.0 years ago James Anderson ▴ 820
0
votes
6
replies
2.9k
views
warning message in KS test
updated 18.0 years ago by ★ 1.3k • written 18.0 years ago by ▴ 820
0
votes
2
replies
808
views
about label permutation test for binary classification
updated 18.1 years ago by ▴ 730 • written 18.1 years ago by ▴ 820
0
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0
replies
808
views
Comment: C: about label permutation test for binary classification
18.1 years ago James Anderson ▴ 820
0
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1
reply
749
views
question regarding unbalanced two way anova with interaction term
updated 18.2 years ago by ▴ 70 • written 18.2 years ago by ▴ 820
0
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0
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349
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question regarding the effect of mean centering and scaling on classification
18.2 years ago James Anderson ▴ 820
0
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1
reply
1.4k
views
Answer: A: about two way anova on time and treatment
18.3 years ago James Anderson ▴ 820
0
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2
replies
1.0k
views
about two way anova on time and treatment
updated 18.4 years ago by ▴ 470 • written 18.4 years ago by ▴ 820
0
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5
replies
819
views
question about scale factor for Affy chip
updated 18.4 years ago by ★ 4.1k • written 18.4 years ago by ▴ 820
0
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1
reply
819
views
Comment: C: question about scale factor for Affy chip
18.4 years ago James Anderson ▴ 820
0
votes
1
reply
819
views
Comment: C: question about scale factor for Affy chip
18.4 years ago James Anderson ▴ 820
0
votes
3
replies
583
views
QC question using simpleaffy
updated 18.4 years ago by 1.6k • written 18.4 years ago by ▴ 820
0
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1
reply
583
views
Comment: C: QC question using simpleaffy
18.4 years ago James Anderson ▴ 820
0
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4
replies
2.0k
views
how to load RData in a loop with different file name?
updated 18.4 years ago by ▴ 730 • written 18.4 years ago by ▴ 820
0
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0
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2.0k
views
Comment: C: how to load RData in a loop with different file name?
18.4 years ago James Anderson ▴ 820
0
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1
reply
782
views
Comment: C: question about U133 plus 2.0 array
18.4 years ago James Anderson ▴ 820
0
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3
replies
782
views
question about U133 plus 2.0 array
updated 18.4 years ago by ★ 1.2k • written 18.4 years ago by ▴ 820
0
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0
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370
views
how to interpret the results from predict(SVMmodel, testdata) ?
18.4 years ago James Anderson ▴ 820
0
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6
replies
2.2k
views
how to see the content of a R function in a package?
updated 18.4 years ago by 25k • written 18.4 years ago by ▴ 820
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