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Solexa fastq files and BLAT
Cancer Biostrings ShortRead Cancer Biostrings ShortRead
updated 5.3 years ago by 0 • written 15.3 years ago by ★ 1.9k
2
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1
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1.3k
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Best way to do quality control and analysis on Exon arrays
Annotation Cancer affy exonmap Annotation Cancer affy exonmap
updated 8.7 years ago by ▴ 10 • written 14.8 years ago by ★ 1.9k
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1.0k
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RMA normalisation of test microarray data to training data
Microarray GO Cancer affy Microarray GO Cancer affy
updated 12.3 years ago by 65k • written 12.3 years ago by ★ 1.9k
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1.4k
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Comment: C: Minimal region of overlap between two GRanges objects
12.4 years ago Daniel Brewer ★ 1.9k
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4
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1.4k
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Minimal region of overlap between two GRanges objects
Cancer Cancer
updated 12.4 years ago by 25k • written 12.4 years ago by ★ 1.9k
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1.2k
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Bioinformatics/biostatistics position at the Institute of Cancer Research, UK
Sequencing Microarray Genetics Cancer Sequencing Microarray Genetics Cancer
12.5 years ago Daniel Brewer ★ 1.9k
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Answer: A: Average based on group
13.0 years ago Daniel Brewer ★ 1.9k
0
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1
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904
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UK Beginner bioconductor courses
Cancer Cancer
updated 13.0 years ago by ▴ 40 • written 13.0 years ago by ★ 1.9k
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0
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675
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Normalising to Agilent controls in a two-colour experiment
Cancer Cancer
13.0 years ago Daniel Brewer ★ 1.9k
0
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0
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836
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Limma: design for a multiple level factor taking into account centre and plate
Microarray Cancer Microarray Cancer
13.4 years ago Daniel Brewer ★ 1.9k
0
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1.3k
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Comment: C: Best way to get updated annotation for BACs
13.5 years ago Daniel Brewer ★ 1.9k
0
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0
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1.3k
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Comment: C: Best way to get updated annotation for BACs
13.5 years ago Daniel Brewer ★ 1.9k
0
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1
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1.3k
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Comment: C: Best way to get updated annotation for BACs
13.5 years ago Daniel Brewer ★ 1.9k
0
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6
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1.3k
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Best way to get updated annotation for BACs
Microarray Annotation Cancer BAC Microarray Annotation Cancer BAC
updated 13.5 years ago by 21k • written 13.5 years ago by ★ 1.9k
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1
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946
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GEOquery: Best way to get a phenodata table from GSE
Cancer Cancer
updated 13.5 years ago by 21k • written 13.5 years ago by ★ 1.9k
0
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0
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661
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Sources of information about amplified genes in cancer
Cancer Cancer
13.6 years ago Daniel Brewer ★ 1.9k
2
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2
replies
4.8k
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Genecards v3 access
Cancer Cancer
updated 13.6 years ago by 21k • written 13.6 years ago by ★ 1.9k
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2
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1.4k
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Comment: C: Machine learning, cross validation and gene selection
13.7 years ago Daniel Brewer ★ 1.9k
0
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4
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1.4k
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Machine learning, cross validation and gene selection
GO Cancer GO Cancer
updated 13.7 years ago by 6.7k • written 13.7 years ago by ★ 1.9k
0
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1.9k
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Answer: A: Biobase: How to replace the ExpressionSet phenoData?
13.7 years ago Daniel Brewer ★ 1.9k
1
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1
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1.9k
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Biobase: How to replace the ExpressionSet phenoData?
Cancer Cancer
13.7 years ago Daniel Brewer ★ 1.9k
0
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1
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1.3k
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Comment: C: xps: root.profile on a asubset of the data
13.7 years ago Daniel Brewer ★ 1.9k
0
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7
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1.3k
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xps: root.profile on a asubset of the data
Cancer xps Cancer xps
updated 13.7 years ago by ★ 3.9k • written 13.7 years ago by ★ 1.9k
0
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2
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1.3k
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Comment: C: xps: root.profile on a asubset of the data
13.7 years ago Daniel Brewer ★ 1.9k
0
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0
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993
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Comment: C: Quality control on Human Affymetrix Exon microarrays
13.7 years ago Daniel Brewer ★ 1.9k
0
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2
replies
993
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Quality control on Human Affymetrix Exon microarrays
GO Cancer probe affyQCReport GO Cancer probe affyQCReport
updated 13.7 years ago by ★ 13k • written 13.7 years ago by ★ 1.9k
0
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664
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xps: RMA background plot using ROOT graphics
Cancer xps Cancer xps
updated 13.7 years ago by ★ 3.9k • written 13.7 years ago by ★ 1.9k
0
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1
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1.6k
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LIMMA: Suitable measure of error from result object. stdev.unscaled?
Microarray Cancer limma Microarray Cancer limma
updated 13.9 years ago by 50k • written 14.0 years ago by ★ 1.9k
0
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0
replies
851
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Affy exon array equivalents of QC packages (affyPLM, arrayQualityMetrics & affyQCReport)
Cancer affyPLM affyQCReport arrayQualityMetrics Cancer affyPLM affyQCReport
14.0 years ago Daniel Brewer ★ 1.9k
0
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0
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3.5k
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Comment: C: Limma and logistic regression
14.1 years ago Daniel Brewer ★ 1.9k
3
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2
replies
3.5k
views
Limma and logistic regression
Microarray Cancer limma Microarray Cancer limma
updated 14.1 years ago by ▴ 340 • written 14.1 years ago by ★ 1.9k
0
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1
reply
837
views
clusterStab using a correlation distance
Microarray Cancer clusterStab Microarray Cancer clusterStab
updated 14.1 years ago by 65k • written 14.1 years ago by ★ 1.9k
0
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2
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1.1k
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cvArray error from AgiMicroRna package
Cancer microRNA Cancer microRNA
14.2 years ago Daniel Brewer ★ 1.9k
0
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1
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1.1k
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Answer: A: cvArray error from AgiMicroRna package
14.2 years ago Daniel Brewer ★ 1.9k
0
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0
replies
586
views
rma.background.correct produces lots of NaNs for one array
Cancer Cancer
14.2 years ago Daniel Brewer ★ 1.9k
0
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6
replies
1.8k
views
Normalisation of Agilent microRNA arrays using inbuilt controls?
GO Cancer vsn AgiMicroRna GO Cancer vsn AgiMicroRna
updated 14.2 years ago by ★ 3.6k • written 14.2 years ago by ★ 1.9k
0
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5
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1.5k
views
Best options for cross validation machine learning
Microarray Clustering Cancer Microarray Clustering Cancer
updated 14.3 years ago by ▴ 450 • written 14.3 years ago by ★ 1.9k
0
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1
reply
623
views
Grid layout to data.frame with row & colums
Cancer convert Cancer convert
updated 14.4 years ago by 65k • written 14.4 years ago by ★ 1.9k
0
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0
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1.4k
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Comment: C: Gene list ideogram
14.5 years ago Daniel Brewer ★ 1.9k
0
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3
replies
1.4k
views
Gene list ideogram
Cancer Cancer
updated 14.5 years ago by 6.7k • written 14.5 years ago by ★ 1.9k
0
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2
replies
986
views
KEGGSOAP returning blank pages
Cancer KEGGSOAP Cancer KEGGSOAP
updated 14.7 years ago by ★ 7.2k • written 14.7 years ago by ★ 1.9k
0
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2
replies
1.2k
views
edgeR: deDGE Fisher exact p-values
Cancer edgeR Cancer edgeR
updated 14.7 years ago by ★ 1.1k • written 14.7 years ago by ★ 1.9k
0
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0
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1.2k
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Comment: C: edgeR: deDGE Fisher exact p-values
14.7 years ago Daniel Brewer ★ 1.9k
0
votes
5
replies
1.6k
views
Software to find the area of a shape in an image
Cancer Cancer
updated 14.8 years ago by ▴ 350 • written 14.8 years ago by ★ 1.9k
0
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0
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1.3k
views
Comment: C: Oligo error on OS X Leopard
14.8 years ago Daniel Brewer ★ 1.9k
0
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4
replies
1.3k
views
Oligo error on OS X Leopard
Cancer oligo Cancer oligo
updated 14.8 years ago by 6.7k • written 14.8 years ago by ★ 1.9k
0
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0
replies
770
views
KEGGSOAP install problem
Cancer KEGGSOAP Cancer KEGGSOAP
15.0 years ago Daniel Brewer ★ 1.9k
0
votes
1
reply
660
views
Best way to find genes that represent a group
Microarray Cancer limma Microarray Cancer limma
updated 15.0 years ago by 21k • written 15.0 years ago by ★ 1.9k
0
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0
replies
918
views
Comment: C: How to get a development version of a package?
15.0 years ago Daniel Brewer ★ 1.9k
0
votes
4
replies
918
views
How to get a development version of a package?
Cancer Cancer
15.0 years ago Daniel Brewer ★ 1.9k
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