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4
votes
0
replies
356
views
News:
Bioconductor 3.19 is Released!
Release
Bioconductor
Packages
Software
12 weeks ago
shepherl
3.9k
0
votes
7
replies
920
views
News:
List of Deprecated Packages for Bioc3.19
Release
Devel
ExperimentData
Software
4 months ago • updated 3 months ago
shepherl
3.9k
0
votes
1
reply
440
views
News:
Bioconductor 3.19 Release Schedule
Release
release
Software
4 months ago
shepherl
3.9k
5
votes
1
reply
672
views
News:
Bioconductor 3.18 is Released!
Packages
Bioconductor
Release
Software
written 9 months ago by
shepherl
3.9k
2
votes
1
reply
1.3k
views
Software Compatibility Issue Between phyloseq and lme4 Packages
phyloseq
microbiome
Software
updated 10 months ago by
ATpoint
★ 4.2k • written 10 months ago by
HULFRED
▴ 10
0
votes
0
replies
558
views
News:
Bioconductor 3.18 Release Schedule
Release
Software
release
10 months ago
shepherl
3.9k
0
votes
1
reply
474
views
Generate false reads for testing
mgu74bv2cdf
Software
Alignment
updated 13 months ago by
James W. MacDonald
66k • written 13 months ago by
Franck RICHARD
• 0
1
vote
8
replies
1.6k
views
News:
Final List of Deprecated Package Bioc 3.9
deprecation
release
software
experimentData
News
written 5.3 years ago by
shepherl
3.9k
0
votes
0
replies
669
views
News:
Bioconductor 3.17 is Released!
Packages
Release
Bioconductor
Software
15 months ago
shepherl
3.9k
0
votes
0
replies
624
views
News:
Bioconductor 3.17 Release Schedule
Softwar
Release
Bioconductor
release
Software
16 months ago
shepherl
3.9k
3
votes
6
replies
1.2k
views
News:
Bioconductor will rename the default branch on `git.bioconductor.org` to `devel`
Software
Bioconductor
Devel
devel
updated 16 months ago by
darrelvanhoy
• 0 • written 17 months ago by
shepherl
3.9k
0
votes
0
replies
877
views
Job:
Research software engineer at UPF Barcelona
JobPosting
Devel
GSVA
Software
20 months ago
Robert Castelo
★ 3.3k
1
vote
0
replies
910
views
News:
Bioconductor 3.16 is Released!
Release
Packages
Bioconductor
Software
21 months ago
shepherl
3.9k
0
votes
0
replies
788
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.16
Release
Devel
Bioconductor
Software
21 months ago
shepherl
3.9k
8
votes
0
replies
983
views
News:
Bioconductor 3.15 is Released!
Software
Release
Packages
Bioconductor
2.2 years ago
shepherl
3.9k
0
votes
0
replies
681
views
News:
New Package Submission Deadline Tomorrow for Bioconductor 3.15
Release
Software
Bioconductor
Devel
2.3 years ago
shepherl
3.9k
0
votes
5
replies
1.4k
views
News:
Final List of Deprecated Packages for Bioc3.14
ExperimentData
Deprecation
Software
Release
Workflow
2.8 years ago • updated 2.3 years ago
shepherl
3.9k
8
votes
0
replies
988
views
News:
Bioconductor 3.14 is Released!
release
Packages
Software
Release
Bioconductor
2.7 years ago
shepherl
3.9k
0
votes
0
replies
914
views
Job:
Hiring Bioinformaticians, Data Engineers, & Computer Scientists @ Flagship Labs 77
data
immunology
software
vaccinology
2.9 years ago
Daniel
• 0
5
votes
0
replies
1.1k
views
News:
Bioconductor 3.13 is Released!
Release
Bioconductor
Packages
Software
3.2 years ago
shepherl
3.9k
2
votes
2
replies
1.6k
views
News:
Final List of Deprecated Packages for Bioc3.13
Workflow
Software
ExperimentData
Deprecation
3.6 years ago • updated 3.2 years ago
shepherl
3.9k
4
votes
0
replies
1000
views
News:
Bioconductor 3.12 is Released!
Software
release
Bioconductor
Packages
Release
3.7 years ago
shepherl
3.9k
1
vote
2
replies
1.5k
views
News:
Final List of Deprecated Packages for Bioc3.12
annotation
software
experimentdata
deprecated
News
3.8 years ago
shepherl
3.9k
0
votes
0
replies
1.2k
views
Job:
R programmer position in genetic epidemiology/bioconductor
genetics
genomics
software
Job
3.8 years ago
Vincent J. Carey, Jr.
6.7k
2
votes
4
replies
1.3k
views
Bioconductor package development
package
R
software
development
updated 3.8 years ago by
Martin Morgan
25k • written 3.8 years ago by
Dany
• 0
3
votes
0
replies
1.5k
views
News:
List of Deprecated Packages for Bioc3.12
annotation
software
experiment data
deprecated
News
3.9 years ago • updated 3.8 years ago
shepherl
3.9k
0
votes
2
replies
874
views
What is Software, Annotationdata, Experimentdata and workflow category?
Software
annotation
experiment
workflow
updated 3.9 years ago by
shepherl
3.9k • written 4.0 years ago by
gnanaprakash.s
• 0
0
votes
0
replies
905
views
News:
List of Deprecated Packages for Bioc3.12
deprecated
experiment data
software
annotation
News
4.1 years ago
shepherl
3.9k
0
votes
2
replies
877
views
Problem in dowloading "TxDb.Hsapiens.UCSC.hg38.knownGene"
annotation
software
TxDb
updated 4.2 years ago by
James W. MacDonald
66k • written 4.2 years ago by
AmalAbdel-Aziz
• 0
0
votes
3
replies
1.1k
views
News:
Final List of Deprecated Packages for Bioc3.11
software
annotation
experiment data
deprecated
News
updated 4.2 years ago by
kayla.interdonato
▴ 160 • written 4.3 years ago by
shepherl
3.9k
4
votes
0
replies
868
views
News:
Bioconductor 3.11 is Released!
software
bioconductor
release
packages
News
4.2 years ago
shepherl
3.9k
0
votes
0
replies
865
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.4 years ago
shepherl
3.9k
0
votes
1
reply
929
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.6 years ago
shepherl
3.9k
1
vote
1
reply
1.1k
views
How to use ENCprime via coRdon with a custom background sequence set?
software
codon
usage
bias
dna
updated 4.6 years ago by
anamaria
▴ 10 • written 4.6 years ago by
jol.espinoz
▴ 40
0
votes
0
replies
947
views
News:
List of Deprecated Packages Bioc 3.11
annotation
experimentdata
software
release
deprecation
News
4.7 years ago
shepherl
3.9k
0
votes
2
replies
1.7k
views
News:
Final List of Deprecated Packages for Bioc3.10
annotation
experimentdata
deprecation
release
software
News
4.8 years ago • updated 4.7 years ago
shepherl
3.9k
2
votes
2
replies
1.1k
views
News:
Bioconductor Devel 3.11 Notification
software
bioconductor
packages
reports
News
4.7 years ago
shepherl
3.9k
6
votes
0
replies
911
views
News:
Bioconductor 3.10 is released!!
release
software
packages
bioconductor
News
4.7 years ago
shepherl
3.9k
0
votes
0
replies
928
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
4.9 years ago • updated 4.8 years ago
shepherl
3.9k
2
votes
0
replies
2.4k
views
Job:
Bioconductor infrastructure for the integration of genomics, transcriptomics and proteomics data
proteomics
genomics
transcriptomics
software
Job
4.8 years ago
Laurent Gatto
1.6k
0
votes
1
reply
1.1k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
deprecation
release
News
5.0 years ago • updated 4.9 years ago
shepherl
3.9k
0
votes
0
replies
796
views
Job:
Software Developer - BC Cancer Research Center, Vancouver BC
software
bioinformatics
sequecing
Job
5.1 years ago
jmaanaki
• 0
0
votes
3
replies
1.1k
views
News:
List of Deprecated Packages Bioc 3.10
annotation
experimentdata
software
release
deprecation
News
5.1 years ago
shepherl
3.9k
0
votes
1
reply
932
views
News:
Initial List of Deprecated Packages Bioc 3.10
software
experimentdata
release
deprecation
annotation
News
5.2 years ago
shepherl
3.9k
0
votes
1
reply
1.3k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
devel
software
experimentdata
News
5.4 years ago
shepherl
3.9k
0
votes
1
reply
1.2k
views
Meta_analysis of different platforms of microarray data
microarray
meta analysis
cancer
Software
R
updated 5.5 years ago by
James W. MacDonald
66k • written 5.5 years ago by
Jamal
• 0
0
votes
1
reply
1.2k
views
News:
List of Deprecated Package Bioc 3.9
deprecate
release
software
devel
News
5.6 years ago
shepherl
3.9k
0
votes
0
replies
1.1k
views
News:
DEADLINE: All packages to pass R CMD build and R CMD check
release
software
experimentdata
workflows
News
6.3 years ago
shepherl
3.9k
0
votes
8
replies
2.3k
views
How to use the QUIDE-seq R/python package to remove non-genomic DNA sequences?
annotation
software
software error
updated 8.1 years ago by
Julie Zhu
★ 4.3k • written 8.2 years ago by
mousheng xu
▴ 10
1
vote
3
replies
1.7k
views
Are there any bioconductor github mirrors for data packages?
software
bioc-devel
developers
R
updated 8.7 years ago by
Dan Tenenbaum
★ 8.2k • written 8.7 years ago by
MarcinKosiński
• 0
50 results • Page
1 of 1
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Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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