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Answer: A: goseq: gene universe
13.8 years ago Jenny Drnevich ★ 2.0k
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2.9k
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goseq KEGG testing?
Pathways GO PROcess Category goseq Pathways GO PROcess Category goseq
updated 13.8 years ago by ▴ 40 • written 13.8 years ago by ★ 2.0k
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Answer: A: Detection calls and LIMMA
13.8 years ago Jenny Drnevich ★ 2.0k
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0
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782
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edgeR - expressen between genes
edgeR edgeR
13.9 years ago Jenny Drnevich ★ 2.0k
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0
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1.5k
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Answer: A: Using Limma for common reference and paired samples
13.9 years ago Jenny Drnevich ★ 2.0k
0
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1.5k
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Answer: A: Using Limma for common reference and paired samples
13.9 years ago Jenny Drnevich ★ 2.0k
0
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0
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724
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Help expanding limmaUsersGuide section 8.7 to 3x2 factorial
GO GO
14.0 years ago Jenny Drnevich ★ 2.0k
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0
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1.1k
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Help expanding limmaUsersGuide section 8.7 to 3x2 factorial
14.0 years ago Jenny Drnevich ★ 2.0k
0
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1
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5.0k
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Comment: C: Using eBayes to find P values for individual contrasts
14.1 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.6k
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Comment: C: can't get limma for R 2.12.0 x64?
14.1 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.6k
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Comment: C: can't get limma for R 2.12.0 x64?
14.1 years ago Jenny Drnevich ★ 2.0k
0
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6
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1.6k
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can't get limma for R 2.12.0 x64?
GO limma GO limma
updated 14.1 years ago by ▴ 100 • written 14.1 years ago by ★ 2.0k
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1
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2.3k
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Comment: C: reading data from Beadarray into R
14.3 years ago Jenny Drnevich ★ 2.0k
0
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1
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2.3k
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Comment: C: reading data from Beadarray into R
14.3 years ago Jenny Drnevich ★ 2.0k
0
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6
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1.6k
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question regarding removing probes/probe sets before normalization
cdf probe cdf probe
14.3 years ago Jenny Drnevich ★ 2.0k
0
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0
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1.6k
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Answer: A: question regarding removing probes/probe sets before normalization
14.3 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.6k
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Answer: A: question regarding removing probes/probe sets before normalization
14.3 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.6k
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Answer: A: question regarding removing probes/probe sets before normalization
14.3 years ago Jenny Drnevich ★ 2.0k
0
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0
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549
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question regarding removing probes/probe sets before normalization
cdf probe cdf probe
14.3 years ago Jenny Drnevich ★ 2.0k
0
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0
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2.2k
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Answer: A: Limma: topTable without eBayes?
14.3 years ago Jenny Drnevich ★ 2.0k
0
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0
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1.1k
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Answer: A: Nested Design (Again) & Subset WithinArray Correlation
14.4 years ago Jenny Drnevich ★ 2.0k
0
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1
reply
887
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Error in readBeadSummaryData
beadarray beadarray
updated 14.5 years ago by ▴ 620 • written 14.5 years ago by ★ 2.0k
0
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1
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705
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removing probes from affybatch error
cdf probe affy cdf probe affy
updated 14.8 years ago by 67k • written 14.8 years ago by ★ 2.0k
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0
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1.1k
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Answer: A: Heatmap: row labels & dendogram
14.8 years ago Jenny Drnevich ★ 2.0k
0
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0
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1.3k
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Comment: C: Limma-Contrasts-Question
14.8 years ago Jenny Drnevich ★ 2.0k
0
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1
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3.7k
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Answer: A: problems when trying to use biomaRt
14.8 years ago Jenny Drnevich ★ 2.0k
0
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1
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3.7k
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Comment: C: problems when trying to use biomaRt
14.8 years ago Jenny Drnevich ★ 2.0k
0
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0
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3.7k
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Answer: A: problems when trying to use biomaRt
14.8 years ago Jenny Drnevich ★ 2.0k
0
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0
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3.7k
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Answer: A: problems when trying to use biomaRt
14.8 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.3k
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Comment: C: Limma-Contrasts-Question
14.8 years ago Jenny Drnevich ★ 2.0k
0
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1
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706
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can't use weights in single channel analysis?
Normalization GO Normalization GO
updated 14.8 years ago by 52k • written 14.8 years ago by ★ 2.0k
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0
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845
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Rcode for removing probes
Normalization cdf probe affy Normalization cdf probe affy
14.9 years ago Jenny Drnevich ★ 2.0k
0
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1
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940
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FW: Problem in masking individual probes to calculate expression values
cdf probe gcrma cdf probe gcrma
updated 14.9 years ago by ▴ 50 • written 14.9 years ago by ★ 2.0k
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4
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1.3k
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Discrepancy on results from gcrma function and justGCRMA
gcrma GLAD gcrma GLAD
updated 14.9 years ago by 67k • written 14.9 years ago by ★ 2.0k
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1
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1.3k
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Comment: C: Discrepancy on results from gcrma function and justGCRMA
14.9 years ago Jenny Drnevich ★ 2.0k
0
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1
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814
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GOstats testing using EntrezGene IDs not in chip-specific annotation package?
GO zebrafish probe affy GOstats AnnotationDbi GO zebrafish probe affy GOstats
updated 14.9 years ago by ★ 2.0k • written 14.9 years ago by ★ 2.0k
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3
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1.5k
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WARNING: difference in sorting order depending on computer platform?!?
GO probe GO probe
updated 14.9 years ago by ★ 7.4k • written 14.9 years ago by ★ 2.0k
0
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0
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803
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Answer: A: FW: Problem in masking individual probes to calculate expression values
14.9 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.2k
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extracting all GO terms from GOHyperGResult object?
Annotation GO hgu95av2 GOstats Annotation GO hgu95av2 GOstats
updated 14.9 years ago by ▴ 610 • written 14.9 years ago by ★ 2.0k
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1
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2.3k
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Answer: A: question about lmFit model
14.9 years ago Jenny Drnevich ★ 2.0k
0
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0
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697
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removing probes from affybatch error
cdf probe cdf probe
14.9 years ago Jenny Drnevich ★ 2.0k
0
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1
reply
666
views
R versions 2.10 : simple error, joke or truly intended ?
15.0 years ago Jenny Drnevich ★ 2.0k
0
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0
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666
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Answer: A: R versions 2.10 : simple error, joke or truly intended ?
15.0 years ago Jenny Drnevich ★ 2.0k
0
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0
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1.4k
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Comment: C: Hypergeometric Testing questions
15.0 years ago Jenny Drnevich ★ 2.0k
0
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0
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742
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comparing Limma output from 2 different pre-processing methods
Cancer limma Cancer limma
15.1 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.7k
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Comment: C: problem connecting to bioMart - NOT proxy error
15.1 years ago Jenny Drnevich ★ 2.0k
0
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4
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1.7k
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problem connecting to bioMart - NOT proxy error
biomaRt biomaRt
updated 15.1 years ago by ★ 7.4k • written 15.1 years ago by ★ 2.0k
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0
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678
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small bug in overview function of made4
GO Clustering GO Clustering
15.1 years ago Jenny Drnevich ★ 2.0k
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0
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1.4k
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Answer: A: Correlation analysis of replicates
15.1 years ago Jenny Drnevich ★ 2.0k
0
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0
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618
views
about Rgraphviz
Rgraphviz PROcess Rgraphviz PROcess
15.2 years ago Jenny Drnevich ★ 2.0k
289 results • Page 4 of 6
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