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1.6k
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Comment: Comment: Accounting for Batch effect reduces DEGs drastically
11 months ago Jenny Drnevich ★ 2.0k
0
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0
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820
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Comment: Comment: Reopened: 'Omics data analyst for HPCBio, University of Illinois
20 months ago Jenny Drnevich ★ 2.0k
0
votes
1
reply
820
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Job: Reopened: 'Omics data analyst for HPCBio, University of Illinois
SingleCell Spatial RNA-seq
20 months ago Jenny Drnevich ★ 2.0k
0
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1
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813
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Job: 'Omics data analyst for HPCBio, University of Illinois
SingleCell rnaseq methylationArrayAnalysis Spatial
written 22 months ago by ★ 2.0k
0
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0
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5.3k
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Comment: Comment: Easy way to turn OrgDb object from AnnotationHub into package?
2.1 years ago Jenny Drnevich ★ 2.0k
0
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0
replies
1.1k
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Comment: Comment: 'Omics data analyst for HPCBio, University of Illinois
2.2 years ago Jenny Drnevich ★ 2.0k
0
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1
reply
1.1k
views
Job: 'Omics data analyst for HPCBio, University of Illinois
Metagenomics GenomicVariation Genomics RNASeq ChIPSeq
2.2 years ago Jenny Drnevich ★ 2.0k
0
votes
3
replies
2.3k
views
Problem in kegga() and others getting data from KEGG after switch from http to https
limma KEGGREST EGSEA
updated 2.3 years ago by 4.0k • written 2.3 years ago by ★ 2.0k
0
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0
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2.3k
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Comment: Comment: Problem in kegga() and others getting data from KEGG after switch from http to h
2.3 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
795
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Job: Director of Metabolomics, University of Illinois Urbana-Champaign
Metabolomics
2.5 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
770
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Job: Research Scientist/Senior Research Scientist - National Center for Supercomputing Applications, Univ. of Illinois
supercomputing bioinformatics VariantCalling healthcare Agriculture
2.8 years ago Jenny Drnevich ★ 2.0k
0
votes
2
replies
1.1k
views
glimmaMA() produces blank plot if have annot column named "gene"
Glimma
updated 2.6 years ago by ▴ 40 • written 3.4 years ago by ★ 2.0k
0
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0
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1.6k
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Comment: C: Can't select GO from AnnotationHub orgDB packages
4.2 years ago Jenny Drnevich ★ 2.0k
0
votes
2
replies
1.6k
views
Can't select GO from AnnotationHub orgDB packages
GO.db AnnotationHub OrgDB
updated 4.2 years ago by 67k • written 4.2 years ago by ★ 2.0k
0
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1
reply
2.0k
views
GO vs GOALL in rrvgo and GOSemSim
rrvgo GOSemSim GO.db
4.4 years ago Jenny Drnevich ★ 2.0k
3
votes
6
replies
2.7k
views
How to manage AnnotationHub snapshots / most OrgDB are missing?
AnnotationHub OrgDb snapshotDate
updated 2.2 years ago by 4.0k • written 4.4 years ago by ★ 2.0k
1
vote
0
replies
2.7k
views
Comment: C: How to manage AnnotationHub snapshots / most OrgDB are missing?
4.4 years ago Jenny Drnevich ★ 2.0k
0
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1
reply
1.4k
views
Comment: C: Issues with normalizing viral-infected single cell data
4.5 years ago Jenny Drnevich ★ 2.0k
0
votes
4
replies
1.4k
views
Issues with normalizing viral-infected single cell data
scan scater single cell normalization
updated 4.5 years ago by ★ 28k • written 4.5 years ago by ★ 2.0k
0
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0
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1.4k
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Comment: C: Issues with normalizing viral-infected single cell data
4.5 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
840
views
cqn vignette error
cqn normalization edger
4.8 years ago Jenny Drnevich ★ 2.0k
0
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1
reply
1.3k
views
Comment: C: BioC2018 Workshop book not linked from Bioconductor.org?
5.5 years ago Jenny Drnevich ★ 2.0k
4
votes
4
replies
1.3k
views
BioC2018 Workshop book not linked from Bioconductor.org?
conference book website
updated 5.5 years ago by ▴ 160 • written 5.5 years ago by ★ 2.0k
0
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1
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2.5k
views
Comment: C: Change default prior.count in glmFit() to match cpm(), aveLogCPM(), etc?
5.9 years ago Jenny Drnevich ★ 2.0k
3
votes
3
replies
2.5k
views
Change default prior.count in glmFit() to match cpm(), aveLogCPM(), etc?
edgeR prior.count
updated 5.9 years ago by 51k • written 5.9 years ago by ★ 2.0k
0
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0
replies
1.9k
views
Comment: C: Bioconductor 3.8 is released
updated 5.9 years ago by 25k • written 5.9 years ago by ★ 2.0k
0
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1
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1.9k
views
Comment: C: Bioconductor 3.8 is released
5.9 years ago Jenny Drnevich ★ 2.0k
0
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0
replies
5.3k
views
Comment: C: Easy way to turn OrgDb object from AnnotationHub into package?
6.1 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
1.2k
views
Comment: C: csaw: how to hack filtering windows by negative input controls?
6.2 years ago Jenny Drnevich ★ 2.0k
0
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2
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1.2k
views
csaw: how to hack filtering windows by negative input controls?
csaw
updated 6.2 years ago by ★ 28k • written 6.2 years ago by ★ 2.0k
0
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1
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2.5k
views
Comment: C: bug in estimateDisp() or mistake in documentation?
updated 6.3 years ago by 51k • written 10.2 years ago by ★ 2.0k
1
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0
replies
1.2k
views
Comment: C: Hotels for BioC 2018?
6.5 years ago Jenny Drnevich ★ 2.0k
0
votes
1
reply
1.2k
views
Comment: C: Hotels for BioC 2018?
updated 6.5 years ago by 25k • written 6.5 years ago by ★ 2.0k
2
votes
4
replies
1.2k
views
Hotels for BioC 2018?
conference BioC2018
updated 6.5 years ago by 25k • written 6.5 years ago by ★ 2.0k
0
votes
0
replies
1.5k
views
Job: EXTENDED: Bioinformatics Specialist at the University of Illinois
microbiome epigenomics bioinformatics analyst NGS Job
6.5 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
940
views
Comment: C: Support site search not finding posts?
6.7 years ago Jenny Drnevich ★ 2.0k
0
votes
2
replies
940
views
Support site search not finding posts?
search tximport limma-trend
updated 6.7 years ago by 67k • written 6.7 years ago by ★ 2.0k
0
votes
0
replies
1.4k
views
Job: Bioinformatics Specialist at the University of Illinois
job bioinformatics microbiome metagenomics epigenomics Job
6.7 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
3.2k
views
Comment: C: Problem with tximport(reader = read_tsv) and workaround
6.8 years ago Jenny Drnevich ★ 2.0k
0
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0
replies
2.8k
views
Comment: C: EGSEA generateReport() error "no adj nodes"
6.9 years ago Jenny Drnevich ★ 2.0k
0
votes
5
replies
2.8k
views
EGSEA generateReport() error "no adj nodes"
EGSEA EGSEA123
updated 6.9 years ago by ▴ 40 • written 6.9 years ago by ★ 2.0k
0
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0
replies
2.8k
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Comment: C: EGSEA generateReport() error "no adj nodes"
6.9 years ago Jenny Drnevich ★ 2.0k
0
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0
replies
2.8k
views
Comment: C: EGSEA generateReport() error "no adj nodes"
6.9 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
3.0k
views
Comment: C: Problem using biocLite() to update packages
6.9 years ago Jenny Drnevich ★ 2.0k
0
votes
1
reply
861
views
limma wsva() does not return what it says it will
limma
updated 2.7 years ago by 51k • written 6.9 years ago by ★ 2.0k
0
votes
2
replies
3.0k
views
Problem using biocLite() to update packages
biocLite BiocInstaller variantannotation
updated 6.9 years ago by 67k • written 6.9 years ago by ★ 2.0k
0
votes
1
reply
1.8k
views
Comment: C: GO-terms delivered by GOstats hyperGTest() do not exist in my universe
6.9 years ago Jenny Drnevich ★ 2.0k
0
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1
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1.8k
views
Answer: C: GO-terms delivered by GOstats hyperGTest() do not exist in my universe
6.9 years ago Jenny Drnevich ★ 2.0k
0
votes
0
replies
2.5k
views
Comment: C: tximport recommendation for limma-trend downstream analysis?
7.0 years ago Jenny Drnevich ★ 2.0k
0
votes
1
reply
2.5k
views
Comment: C: tximport recommendation for limma-trend downstream analysis?
7.0 years ago Jenny Drnevich ★ 2.0k
288 results • Page 1 of 6
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