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goseq KEGG testing?
Pathways GO PROcess Category goseq Pathways GO PROcess Category goseq
updated 13.2 years ago by ▴ 40 • written 13.2 years ago by ★ 2.0k
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Answer: A: Detection calls and LIMMA
13.2 years ago Jenny Drnevich ★ 2.0k
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691
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edgeR - expressen between genes
edgeR edgeR
13.3 years ago Jenny Drnevich ★ 2.0k
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1.4k
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Answer: A: Using Limma for common reference and paired samples
13.3 years ago Jenny Drnevich ★ 2.0k
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1.4k
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Answer: A: Using Limma for common reference and paired samples
13.3 years ago Jenny Drnevich ★ 2.0k
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632
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Help expanding limmaUsersGuide section 8.7 to 3x2 factorial
GO GO
13.4 years ago Jenny Drnevich ★ 2.0k
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958
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Help expanding limmaUsersGuide section 8.7 to 3x2 factorial
13.4 years ago Jenny Drnevich ★ 2.0k
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4.6k
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Comment: C: Using eBayes to find P values for individual contrasts
13.5 years ago Jenny Drnevich ★ 2.0k
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1.4k
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Comment: C: can't get limma for R 2.12.0 x64?
13.6 years ago Jenny Drnevich ★ 2.0k
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1.4k
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Comment: C: can't get limma for R 2.12.0 x64?
13.6 years ago Jenny Drnevich ★ 2.0k
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6
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1.4k
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can't get limma for R 2.12.0 x64?
GO limma GO limma
updated 13.6 years ago by ▴ 100 • written 13.6 years ago by ★ 2.0k
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2.1k
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Comment: C: reading data from Beadarray into R
13.7 years ago Jenny Drnevich ★ 2.0k
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2.1k
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Comment: C: reading data from Beadarray into R
13.7 years ago Jenny Drnevich ★ 2.0k
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1.5k
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Answer: A: question regarding removing probes/probe sets before normalization
13.7 years ago Jenny Drnevich ★ 2.0k
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6
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1.5k
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question regarding removing probes/probe sets before normalization
cdf probe cdf probe
13.7 years ago Jenny Drnevich ★ 2.0k
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1.5k
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Answer: A: question regarding removing probes/probe sets before normalization
13.7 years ago Jenny Drnevich ★ 2.0k
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1
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1.5k
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Answer: A: question regarding removing probes/probe sets before normalization
13.7 years ago Jenny Drnevich ★ 2.0k
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0
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481
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question regarding removing probes/probe sets before normalization
cdf probe cdf probe
13.8 years ago Jenny Drnevich ★ 2.0k
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0
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2.1k
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Answer: A: Limma: topTable without eBayes?
13.8 years ago Jenny Drnevich ★ 2.0k
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0
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953
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Answer: A: Nested Design (Again) & Subset WithinArray Correlation
13.8 years ago Jenny Drnevich ★ 2.0k
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1
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813
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Error in readBeadSummaryData
beadarray beadarray
updated 13.9 years ago by ▴ 620 • written 13.9 years ago by ★ 2.0k
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1
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647
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removing probes from affybatch error
cdf probe affy cdf probe affy
updated 14.2 years ago by 66k • written 14.2 years ago by ★ 2.0k
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1.0k
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Answer: A: Heatmap: row labels & dendogram
14.2 years ago Jenny Drnevich ★ 2.0k
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0
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1.2k
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Comment: C: Limma-Contrasts-Question
14.2 years ago Jenny Drnevich ★ 2.0k
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1
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3.4k
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Answer: A: problems when trying to use biomaRt
14.2 years ago Jenny Drnevich ★ 2.0k
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1
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3.4k
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Comment: C: problems when trying to use biomaRt
14.2 years ago Jenny Drnevich ★ 2.0k
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0
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3.4k
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Answer: A: problems when trying to use biomaRt
14.2 years ago Jenny Drnevich ★ 2.0k
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0
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3.4k
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Answer: A: problems when trying to use biomaRt
14.2 years ago Jenny Drnevich ★ 2.0k
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1
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1.2k
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Comment: C: Limma-Contrasts-Question
14.2 years ago Jenny Drnevich ★ 2.0k
0
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1
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641
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can't use weights in single channel analysis?
Normalization GO Normalization GO
updated 14.2 years ago by 50k • written 14.2 years ago by ★ 2.0k
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0
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761
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Rcode for removing probes
Normalization cdf probe affy Normalization cdf probe affy
14.3 years ago Jenny Drnevich ★ 2.0k
0
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1
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853
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FW: Problem in masking individual probes to calculate expression values
cdf probe gcrma cdf probe gcrma
updated 14.3 years ago by ▴ 50 • written 14.3 years ago by ★ 2.0k
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4
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1.1k
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Discrepancy on results from gcrma function and justGCRMA
gcrma GLAD gcrma GLAD
updated 14.3 years ago by 66k • written 14.3 years ago by ★ 2.0k
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1.1k
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Comment: C: Discrepancy on results from gcrma function and justGCRMA
14.3 years ago Jenny Drnevich ★ 2.0k
0
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1
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727
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GOstats testing using EntrezGene IDs not in chip-specific annotation package?
GO zebrafish probe affy GOstats AnnotationDbi GO zebrafish probe affy GOstats
updated 14.3 years ago by ★ 2.0k • written 14.3 years ago by ★ 2.0k
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3
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1.3k
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WARNING: difference in sorting order depending on computer platform?!?
GO probe GO probe
updated 14.3 years ago by ★ 7.4k • written 14.3 years ago by ★ 2.0k
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708
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Answer: A: FW: Problem in masking individual probes to calculate expression values
14.3 years ago Jenny Drnevich ★ 2.0k
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1
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1.1k
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extracting all GO terms from GOHyperGResult object?
Annotation GO hgu95av2 GOstats Annotation GO hgu95av2 GOstats
updated 14.4 years ago by ▴ 610 • written 14.4 years ago by ★ 2.0k
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1
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2.0k
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Answer: A: question about lmFit model
14.4 years ago Jenny Drnevich ★ 2.0k
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0
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636
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removing probes from affybatch error
cdf probe cdf probe
14.4 years ago Jenny Drnevich ★ 2.0k
0
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1
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602
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R versions 2.10 : simple error, joke or truly intended ?
14.4 years ago Jenny Drnevich ★ 2.0k
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0
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602
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Answer: A: R versions 2.10 : simple error, joke or truly intended ?
14.4 years ago Jenny Drnevich ★ 2.0k
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0
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1.2k
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Comment: C: Hypergeometric Testing questions
14.5 years ago Jenny Drnevich ★ 2.0k
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0
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642
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comparing Limma output from 2 different pre-processing methods
Cancer limma Cancer limma
14.5 years ago Jenny Drnevich ★ 2.0k
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1
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1.5k
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Comment: C: problem connecting to bioMart - NOT proxy error
14.5 years ago Jenny Drnevich ★ 2.0k
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4
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1.5k
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problem connecting to bioMart - NOT proxy error
biomaRt biomaRt
updated 14.5 years ago by ★ 7.4k • written 14.5 years ago by ★ 2.0k
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0
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601
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small bug in overview function of made4
GO Clustering GO Clustering
14.6 years ago Jenny Drnevich ★ 2.0k
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0
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1.3k
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Answer: A: Correlation analysis of replicates
14.6 years ago Jenny Drnevich ★ 2.0k
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0
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568
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about Rgraphviz
Rgraphviz PROcess Rgraphviz PROcess
14.6 years ago Jenny Drnevich ★ 2.0k
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0
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834
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Answer: A: Does hist (affy) function work on probe-pair values or probe-set values?
14.6 years ago Jenny Drnevich ★ 2.0k
288 results • Page 4 of 6
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