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137
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
4 months ago • updated 12 weeks ago Luo Weijun ★ 1.5k
0
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0
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149
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Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
4 months ago m.jackson • 0
1
vote
4
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302
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P adjusted values in Deseq2
DESeq2 Statistics
6 months ago Jesus • 0
0
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0
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156
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
6 months ago António Miguel de Jesus Domingues ▴ 480
0
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0
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236
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Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
7 months ago Laura • 0
0
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0
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167
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
8 months ago • updated 4 months ago Luo Weijun ★ 1.5k
1
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2
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170
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Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 9 months ago by 33k • written 9 months ago by ▴ 40
2
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0
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202
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Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
10 months ago Johannes Rainer ★ 1.9k
0
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0
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166
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Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
12 months ago • updated 8 months ago whduke • 0
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0
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1.2k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
3.1 years ago • updated 8 months ago Luo Weijun ★ 1.5k
1
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0
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161
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Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
14 months ago Fred Hutch (Recruiting) ▴ 40
3
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0
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1.4k
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Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
21 months ago • updated 19 months ago Gordon Smyth 43k
0
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0
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592
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
2.5 years ago • updated 20 months ago Luo Weijun ★ 1.5k
0
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1
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138
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How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
20 months ago A • 0
0
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1
reply
200
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Exclude interaction terms from the design
deseq2 statistics modelling
updated 21 months ago by 33k • written 21 months ago by • 0
2
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2
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383
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How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 22 months ago by 43k • written 22 months ago by ▴ 10
0
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0
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259
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Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
23 months ago tatabox • 0
3
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3
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360
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Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 2.2 years ago by 33k • written 2.2 years ago by • 0
0
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1
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308
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Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
2.5 years ago naglemi ▴ 10
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0
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240
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package for mismatch distribution?
genetics statistics
2.5 years ago myriam.croze07 • 0
0
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4
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891
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DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 2.6 years ago by 33k • written 2.6 years ago by • 0
1
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2
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404
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Newbie to all of this
bioconductor statistics
2.8 years ago sportwoo • 0
8
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8
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2.7k
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Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 2.8 years ago by 7.6k • written 2.8 years ago by ▴ 50
1
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2
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362
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What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 2.9 years ago by 57k • written 2.9 years ago by • 0
1
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4
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520
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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
2.9 years ago Andrea Carenzo • 0
0
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2
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416
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comparing two GOstats result lists
gostats statistics
updated 3.1 years ago by 57k • written 3.1 years ago by ▴ 10
1
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0
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498
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Job: Statistical Research Associate
biostatistics statistics sas git assay Job
3.2 years ago Fred Hutch (Recruiting) ▴ 40
0
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0
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449
views
DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
3.3 years ago floriandeckert ▴ 30
0
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0
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475
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
3.3 years ago kieranrcampbell ▴ 30
0
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0
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473
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Two questions about pathifier package
pathways statistics microarray
3.5 years ago arronar • 0
11
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6
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3.9k
views
Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 3.8 years ago by 57k • written 3.8 years ago by ▴ 20
2
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4
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521
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Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 3.8 years ago by 13k • written 3.8 years ago by ▴ 70
0
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0
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583
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Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
3.8 years ago rbronste ▴ 60
0
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0
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833
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
4.5 years ago • updated 4.3 years ago Luo Weijun ★ 1.5k
1
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2
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1.3k
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how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 4.4 years ago by • 0 • written 6.4 years ago by ▴ 80
0
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0
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746
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Job: Bioinformaticist, Research Programmer
R genomics statistics Job
4.4 years ago radel • 0
1
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2
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1.8k
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the statistical test that DESeq2 use
deseq2 statistics
updated 4.5 years ago by 7.6k • written 4.5 years ago by • 0
2
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2
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3.8k
views
edgeR: How is FDR calculated for logFC? (False Discovery Rate)
edgeR bioconductor fdr statistics differential gene expression
4.6 years ago jol.espinoz ▴ 40
1
vote
0
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940
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Job: PhD Positions in Computational Cancer Research
computational biology image analysis cancer genomics statistics Job
4.6 years ago Bernd Fischer ▴ 540
0
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0
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656
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Job: Seeking computational biologists with expertise in RNA-Seq and/or statistics at Immuneering Corporation, Cambridge MA and New York NY
rna-seq CNS Neurodegeneration statistics computational biology Job
4.8 years ago mmartin ▴ 20
0
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0
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714
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Job: Postdoc in Biostatistics/Bioinformatics at UNC Charlotte, NC, USA
genetics/genomics omics data statistics development R Job
5.0 years ago • updated 4.9 years ago Luo Weijun ★ 1.5k
0
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0
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1.2k
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News: Workshop on Statistical Challenges in Single-Cell Biology, April 30 to May 5, 2017, at Villa Monte Verita, Ascona
workshop statistics single-cell News
4.9 years ago Wolfgang Huber 13k
0
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0
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1.2k
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Job: Bioinformatics Programmer (Statistician) at University of California at San Francisco
R bioinformatician job Perl Python statistics Job
5.3 years ago • updated 5.0 years ago clif.duhn • 0
0
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4
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3.4k
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10 multiple comparisons in DESeq2
deseq2 rnaseq statistics
updated 5.1 years ago by 33k • written 5.1 years ago by • 0
2
votes
3
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828
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RNAseq outlier is a critical sample
rnaseq outlier statistics batch effect
updated 5.1 years ago by 43k • written 5.1 years ago by • 0
2
votes
1
reply
528
views
limma for gene expression analysis with big and unbalanced sample size
limma microarray statistics
updated 5.2 years ago by ★ 27k • written 5.2 years ago by • 0
7
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3
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1.7k
views
Differing topTable() results with Limma with and without specifying coefficient
limma microarray statistics
updated 5.3 years ago by 43k • written 5.3 years ago by • 0
19
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4
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5.5k
views
Confidence intervals on edgeR logFC
edgeR statistics confidence interval
updated 5.3 years ago by • 0 • written 6.8 years ago by ▴ 40
0
votes
2
replies
791
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Compute test-score statistical significance using control-scores from shuffled population
statistics hypotheses R
5.4 years ago Bade ▴ 310
0
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0
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1.0k
views
Job: Computational Biologist (Genome Statistical Analyst) position in CRUK Manchester Institute, UK
job bioinformatics ngs genomics statistics Job
5.4 years ago Hui Sun Leong ▴ 10
50 results • Page 1 of 1
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Answer: How to extract DEG from limmarResults object after beadarray analysis by Gordon Smyth 43k
I am the limma package author, but I don't know how to help you. The beadarray package has done a standard limma analysis but, instead of s…
Comment: An error using Diffbind plotprofile by doug.barrows • 0
Hi there, it's hard to tell how to debug without having the data. Could you potentially send me the object you are attempting to use for th…
Comment: DESeq2 Shrinkage methods for scRNA-Seq by Pedro Tan • 0
Thanks Michael! I will stick to apeglm and incorporate alternate size factors for single cell data. All the best, Pedro
Answer: Macbook M1 install genefilter failed by soda ▴ 10
i have solved this problem by myself. share with you. you need to download gfortran in path /opt/R/arm64/bin this website helped me: **h…
Comment: Best practice for quantifying sncRNA by James W. MacDonald 57k
If you used the QIASeq miRNA library, then you are wasting your time. That library adds the UMI barcodes and is intended for you to then up…
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Answer: Macbook M1 install genefilter failed
BioCAsia Virtual Meeting, 15-18 October 2020
Answer: Selecting pairs of exons from differentially spliced genes
Comment: Idea: Using DESeq2 to test a change in ratio of two genes
Time Series Analysis
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