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Job: Statistics Lectureships at St Andrews
JobPosting computational statistics
24 months ago Andy Lynch ▴ 120
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756
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multipollutant models
statistics Regression r limma
2.2 years ago Jitendra ▴ 10
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930
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DEseq2 : Complex design with a mixture of male and female mice
statistics DESeq2
updated 2.2 years ago by 43k • written 2.2 years ago by • 0
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858
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Further analysis after limma regression output
statistics Epigenetics limma
updated 2.4 years ago by 68k • written 2.4 years ago by ▴ 10
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FPKM t-test vs DEseq2
DESeq2 statistics rna-seq
updated 2.8 years ago by ★ 5.0k • written 2.8 years ago by ▴ 10
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2.3k
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batch effect in EPIC array data
statistics Epigenetics R
updated 3.0 years ago by ▴ 760 • written 3.0 years ago by ▴ 10
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Job: PhD position in Bioinformatics in Jena
Statistics ComputationalBiology Aging MachineLearning
3.1 years ago alena.vanboemmel • 0
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Results analysis of differential gene expression using DESeq2 package
RnaSeqSampleSize statistics DESeq2
updated 3.2 years ago by ★ 1.4k • written 3.2 years ago by • 0
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1.2k
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Statistical test for genomic annotation by ChIPseeker
statistics PeakAnnotation ChIPseeker GuangchuangYu
3.5 years ago arisarkar88 ▴ 40
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Job: Lecturer in Statistics - School of Mathematics and Statistics - University of St Andrews
computational teaching statistics research
3.6 years ago Andy Lynch ▴ 120
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Job: Research Fellow in Prostate Cancer Proteomics (Bioinformatics/Stats/Data Analysis) - University of St Andrews
Multiomics Proteomics Cancer Statistics Bioinformatics
3.6 years ago Andy Lynch ▴ 120
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6
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2.2k
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regression analysis for epic array methylation data using limma
limma Epigenetics STATISTICS R
3.7 years ago Jitendra ▴ 10
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3
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2.3k
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Reading large file (15GB) in R
R Rstudio Bioconducter statistics
updated 4.0 years ago by 21k • written 4.1 years ago by ▴ 10
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5
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1.9k
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P adjusted values in Deseq2
DESeq2 Statistics
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2
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1.6k
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News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
4.3 years ago • updated 3.1 years ago Wolfgang Huber ★ 13k
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1.6k
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
singlecellRNA-Seq pathview statistics R
4.9 years ago • updated 4.8 years ago Luo Weijun ★ 1.6k
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Job: Bioinformatician at MiroBio, Oxford, UK
Transcriptomics Bioconductor Statistics Job Biocon
5.0 years ago m.jackson • 0
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Job: Scientist/Senior Scientist, Statistical Geneticist
Sequencing Genetics GeneticsPed statistics
5.1 years ago António Miguel de Jesus Domingues ▴ 510
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Job: Proteomics Bioinformatician
JobPosting Proteomics Statistics Job
5.2 years ago Laura • 0
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1.3k
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Job: Biostatistics/Bioinformatics Research Scientist at UNC Charlotte
R statistics pathview singlecellRNA-Seq
5.2 years ago • updated 4.9 years ago Luo Weijun ★ 1.6k
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1.8k
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Re-calculation of Padj (P adjusted value)
statistics Benjamini–Hochberg procedure deseq2
updated 5.4 years ago by 43k • written 5.4 years ago by ▴ 60
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Job: Multiple open positions in biomedical statistics at Eurac Research, Italy
epidemiology statistics bioinformatics Job
5.4 years ago Johannes Rainer ★ 2.1k
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Job: Two Bioinformatics Fellowship Positions at US EPA
bioinformatics toxicology Job sequenicng statistics
5.6 years ago • updated 5.3 years ago whduke • 0
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
genomics NGS R genetics statistics
7.6 years ago • updated 5.2 years ago Luo Weijun ★ 1.6k
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1.4k
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Job: Post-Doctoral Research Fellow, Cancer Genomics
genomics seattle bioinformatics data science statistics Job
5.7 years ago Fred Hutch (Recruiting) ▴ 40
3
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3.4k
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Job: Postdoctoral Scientist, Statistical Bioinformatics and Proteomics, WEHI Australia
job proteomics Job statistics
6.3 years ago • updated 6.1 years ago Gordon Smyth 53k
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1.7k
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Job: Postdoc and PhD student in Bioinformatics/Biostatistics
NGS R statistics genomics big data Job
7.0 years ago • updated 6.2 years ago Luo Weijun ★ 1.6k
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1.3k
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How to handle batch effect and interaction with experimental variables
deseq2 statistics differential expression
6.3 years ago A • 0
0
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1
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1.2k
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Exclude interaction terms from the design
deseq2 statistics modelling
updated 6.3 years ago by 43k • written 6.3 years ago by • 0
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How adjusted p-values are calculated in limma
limma r transcriptomics FDR statistics
updated 6.4 years ago by 53k • written 6.4 years ago by ▴ 10
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Proteomics data analysis with DEP no replicates
DEP Proteomics Statistics limma
6.5 years ago tatabox • 0
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Using alternative LFC shrinkage methods for computing p-values in DESeq2
deseq2 apeglm statistics
updated 6.7 years ago by 43k • written 6.7 years ago by • 0
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1.4k
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Efficient resampling in GENESIS or another Bioconductor GWAS package to obtain empirical p-values?
GENESIS GWAS resampling resample statistics
7.0 years ago naglemi ▴ 10
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1.2k
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package for mismatch distribution?
genetics statistics
7.1 years ago myriam.croze07 • 0
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6
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3.8k
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DESeq2 unbalanced sample size
deseq2 bioconductor bioinformatics statistics
updated 3.0 years ago by 43k • written 7.2 years ago by • 0
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1.4k
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Newbie to all of this
bioconductor statistics
7.3 years ago sportwoo • 0
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8
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9.1k
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Voom transformation from counts and normalization to negative values
rnaseq voom limma tcga statistics
updated 7.4 years ago by ★ 7.9k • written 7.4 years ago by ▴ 60
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2
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1.6k
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What to do with microarray probes that catch multiple genes?
affymetrix microarrays microarray probe statistics
updated 7.5 years ago by 68k • written 7.5 years ago by • 0
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4
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Do the gene set statistics of the ROAST paper correspond to those implemented in the .roastEffects R function?
limma roast statistics source code gene set testing
7.5 years ago Andrea Carenzo • 0
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1.6k
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comparing two GOstats result lists
gostats statistics
updated 7.7 years ago by 68k • written 7.7 years ago by ▴ 30
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0
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1.6k
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Job: Statistical Research Associate
biostatistics statistics sas git assay Job
7.8 years ago Fred Hutch (Recruiting) ▴ 40
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1.7k
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DSS DMLTest Prior Estimate of theta dispersion
DSS dmltest bayesian statistics methylation
7.9 years ago floriandeckert ▴ 30
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0
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1.6k
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
single cell cancer genomics statistics News
7.9 years ago kieranrcampbell ▴ 50
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1.6k
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Two questions about pathifier package
pathways statistics microarray
8.1 years ago arronar • 0
28
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7
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14k
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Effect of lfcThreshold on p-value in DESeq2
deseq2 rnaseq statistics
updated 2.4 years ago by ▴ 10 • written 8.4 years ago by ▴ 40
2
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4
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1.8k
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Removing batch effect on edgeR when interactons are looked at
rnaseq edger statistics model matrix
updated 8.4 years ago by ★ 13k • written 8.4 years ago by ▴ 90
0
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0
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1.6k
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Assigning stats to differential peak locations relative to TSS
chipseeker chipseq statistics
8.4 years ago rbronste ▴ 60
0
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0
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2.0k
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Job: Research Scientist in Biostatistics/Bioinformatics
statistics genetics genomics R Job
9.0 years ago • updated 8.9 years ago Luo Weijun ★ 1.6k
1
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2
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2.6k
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how to perform pre ranked GSEA in R?
r microarray statistics GSEA
updated 8.9 years ago by • 0 • written 11.0 years ago by ▴ 80
0
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0
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1.6k
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Job: Bioinformaticist, Research Programmer
R genomics statistics Job
9.0 years ago radel • 0
71 results • Page 1 of 2
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Answer: Unable to create venndiagram using VennDiagram 1.5.1 package by kesha • 0
<a href=https://vavadacasinox.com/>vavadacasinox.com</a>
Comment: How to convert .raw data for use in xcms by a2a2asawhaa • 0
try converting your files to the older mzXML format, which remains highly stable for XCMS. While waiting for large datasets to process, you…
Comment: Which preprocessing steps are needed before running limpa? by miro165sabo • 0
Hi @gordonsmyth, thank you a lot for very fast and valuable response. I edited the question to provide more details.
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ? by Gordon Smyth 53k
I tend to use dpcCN(), because it more robust than dpc() to experiments with lots of samples and big differences between samples. You coul…
Answer: Which preprocessing steps are needed before running limpa? by Gordon Smyth 53k
Please see the example limpa analyses given at <http://github.com/smythlab/limpa>, especially the kidney cancer case study. limpa does not…
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A: Reference paper or resource for limma::diffSplice and edgeR::diffSpliceDGE metho
Answer: Which preprocessing steps are needed before running limpa?
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?
Answer: Which preprocessing steps are needed before running limpa?
Answer: Which preprocessing steps are needed before running limpa?
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