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News: Call for proposals: European CarpentryConnect - 12-14 November 2024, at EMBL Heidelberg
carpentry conference
20 days ago Wolfgang Huber ★ 13k
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1.2k
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Comment: Comment: DESeq2 test for synergistic vs additive effects
27 days ago Wolfgang Huber ★ 13k
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334
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Comment: Comment: EBImage - Selecting parameters for x-ray seed size analysis
4 months ago Wolfgang Huber ★ 13k
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371
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Comment: Comment: DESeq2 interaction between one continuous variable and one categorical variable
5 months ago Wolfgang Huber ★ 13k
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0
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386
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News: EMBO|EMBL Conference "AI and Biology"
EMBL Heidelberg AI Conference
5 months ago Wolfgang Huber ★ 13k
1
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534
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Job: EMBL-EBI Data resources: Functional Genomics and Single Cell Biology Team Leader
JobPosting
8 months ago Wolfgang Huber ★ 13k
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1
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577
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Comment: Comment: TPP2D::import2dDataset() does not return value
9 months ago Wolfgang Huber ★ 13k
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1
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1.2k
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Comment: Comment: DESeq2 test for synergistic vs additive effects
9 months ago Wolfgang Huber ★ 13k
0
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0
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1.2k
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Comment: Comment: DESeq2 test for synergistic vs additive effects
9 months ago Wolfgang Huber ★ 13k
0
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1
reply
1.2k
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Comment: Comment: DESeq2 test for synergistic vs additive effects
10 months ago Wolfgang Huber ★ 13k
0
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1
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747
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Comment: Comment: how to do splot with opls?
12 months ago Wolfgang Huber ★ 13k
1
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0
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737
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News: Biological Data Science summer school 11-16 June in Brixen/Bressanone.
csama
12 months ago Wolfgang Huber ★ 13k
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1.3k
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Comment: Comment: DESEQ2 - What is the recommended workflow in terms of pre-filtering and counts n
12 months ago Wolfgang Huber ★ 13k
2
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0
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750
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Job: Postdoc at EMBL: spatial and single-cell computational biology for precision oncology, based in Heidelberg, Germany
omics Spatial postdoc
13 months ago Wolfgang Huber ★ 13k
0
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1
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756
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Comment: Comment: How to compute(calculate) rlog and vst provided from DESeq2
13 months ago Wolfgang Huber ★ 13k
1
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1
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990
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Comment: Comment: Potential problem with independent filtering in DESeq2
14 months ago Wolfgang Huber ★ 13k
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1.3k
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Tutorial: Online workshop "Working with ChatGPT in R" 2023-03-09
chatgpt programming
updated 15 days ago by • 0 • written 14 months ago by ★ 13k
1
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656
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Answer: Answer: Pseudobulk running all groups together vs subsetting first
14 months ago Wolfgang Huber ★ 13k
1
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1
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527
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Answer: Answer: DE Analysis on cells from a patient derived mouse xenograft with high levels of
14 months ago Wolfgang Huber ★ 13k
0
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1
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887
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Comment: Comment: Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)
15 months ago Wolfgang Huber ★ 13k
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1.0k
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Comment: Comment: Ascona Workshop “Biological systems: from first principles to data-​driven model
15 months ago Wolfgang Huber ★ 13k
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735
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Comment: Comment: IHW for multiple regression
15 months ago Wolfgang Huber ★ 13k
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1
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735
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Comment: Comment: IHW for multiple regression
15 months ago Wolfgang Huber ★ 13k
0
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1
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579
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Answer: Answer: Question regarding averaging DESeq2 results.
20 months ago Wolfgang Huber ★ 13k
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554
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Displaying large image stacks (e.g. from multiplexed immunohistochemistry) using shiny and EBImage
shiny EBImage
21 months ago Wolfgang Huber ★ 13k
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1
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3.8k
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Answer: Answer: Scaling for p.heatmap
22 months ago Wolfgang Huber ★ 13k
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3
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2.0k
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Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chunk
rmarkdown suppressWarning warning
updated 14 months ago by ★ 6.5k • written 2.4 years ago by ★ 13k
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1
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2.0k
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Answer: Answer: Extension to knitr/Rmarkdown to ignore only specific warnings (not all) in a chu
2.3 years ago Wolfgang Huber ★ 13k
0
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0
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712
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Answer: Answer: Problem with ArrayQualityMetrics PCA plot
2.4 years ago Wolfgang Huber ★ 13k
0
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0
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925
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Answer: Answer: cellHTS2 - normalization with BScore (performance
2.4 years ago Wolfgang Huber ★ 13k
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2
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1.0k
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News: Ascona Workshop “Biological systems: from first principles to data-​driven modelling and back” 27. 3. - 1. 4. 2022
theory modeling statistics ascona Workshop
2.5 years ago • updated 15 months ago Wolfgang Huber ★ 13k
2
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0
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1.8k
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Answer: Answer: How to obtain summary statistics for all Bioc releases
2.8 years ago Wolfgang Huber ★ 13k
1
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0
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1.7k
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Comment: Comment: DESeq2 multiple conditions, time points and sample types
3.0 years ago Wolfgang Huber ★ 13k
1
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1
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1.9k
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Answer: Answer: DEXSeq: What's the best way to map an exon counting bin, e.g. E002 to exon(s) or
3.0 years ago Wolfgang Huber ★ 13k
1
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0
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1.4k
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Comment: Comment: Variance stabilising transformation to within given range
3.2 years ago Wolfgang Huber ★ 13k
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0
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1.0k
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Answer: Answer: R Package for Statistical Analysis of High Throughput Screening (HTS) Data
3.2 years ago Wolfgang Huber ★ 13k
0
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1
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1.0k
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Answer: Answer: Independent filtering of NGS data
3.2 years ago Wolfgang Huber ★ 13k
0
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0
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1.1k
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Answer: Answer: Error log when I use biomaRt getBM
3.2 years ago Wolfgang Huber ★ 13k
0
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0
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1.1k
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Comment: Comment: one stratum from vsn2
3.3 years ago Wolfgang Huber ★ 13k
1
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1
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1.7k
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Comment: Comment: change all the negative value into positive value
3.4 years ago Wolfgang Huber ★ 13k
3
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1
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1.7k
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Answer: Answer: change all the negative value into positive value
3.4 years ago Wolfgang Huber ★ 13k
0
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0
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1.1k
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Answer: Answer: Normalisation of protein micro array data using VSN
3.5 years ago Wolfgang Huber ★ 13k
1
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0
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946
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Comment: C: IHW: retain annotation columns in data when running `ihw(pvalue ~ covariate, dat
4.0 years ago Wolfgang Huber ★ 13k
1
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1
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946
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Comment: C: IHW: retain annotation columns in data when running `ihw(pvalue ~ covariate, dat
4.0 years ago Wolfgang Huber ★ 13k
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0
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25k
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Answer: A: lfcShrink doesn't work with contrasts
4.3 years ago Wolfgang Huber ★ 13k
0
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0
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745
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Job: Computational 4D and single-cell expression analysis of animal development and regeneration
multi-omics imaging single-cell analysis Job
4.9 years ago Wolfgang Huber ★ 13k
0
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0
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907
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Answer: A: IHW scale of problem
4.9 years ago Wolfgang Huber ★ 13k
5
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0
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1.1k
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News: Course announcement: Statistical Data Analysis for Genome Scale Biology (CSAMA) - Brixen, Italy 21-26 July 2019
csama News
5.2 years ago • updated 5.1 years ago Wolfgang Huber ★ 13k
1
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0
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801
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Job: Postdoc Position in Computational Single Cell Genetics / Statistical Modeling
job huber embl Job
5.2 years ago Wolfgang Huber ★ 13k
1
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0
replies
4.3k
views
Answer: A: VOOM vs VSN vs log2 to transform proteome data before LIMMA analysis
5.2 years ago Wolfgang Huber ★ 13k
1,428 results • Page 1 of 29
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