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OFF TOPIC How measures is more appropriated to statistical analysis?
17.5 years ago Marcelo Luiz de Laia ▴ 770
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[SAGEnhaft] This library does all post analysis on SAGE or is need another software for to do?
SAGE sagenhaft SAGE sagenhaft
updated 17.6 years ago by ▴ 220 • written 17.6 years ago by ▴ 770
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Comment: C: BioC normalisations for small array 2 colour data?
17.7 years ago Marcelo Luiz de Laia ▴ 770
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891
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design matrix question
limma limma
18.3 years ago Marcelo Luiz de Laia ▴ 770
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1.1k
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limma design: a basics questions for factorial analysis
GO limma GO limma
18.3 years ago Marcelo Luiz de Laia ▴ 770
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908
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Help to analyse a complex experiment
Genetics Normalization vsn limma Genetics Normalization vsn limma
updated 18.3 years ago by ★ 6.0k • written 18.3 years ago by ▴ 770
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Comment: C: [TimeCourse Package] Warnings message
18.3 years ago Marcelo Luiz de Laia ▴ 770
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3
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1.4k
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[TimeCourse Package] Warnings message
Genetics TimeCourse timecourse Genetics TimeCourse timecourse
updated 18.3 years ago by ▴ 440 • written 18.3 years ago by ▴ 770
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1.2k
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Problem with ljava when I run update.packages2
Genetics RMAGEML Genetics RMAGEML
updated 18.3 years ago by 25k • written 18.3 years ago by ▴ 770
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955
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Answer: A: Debian Sarge
18.4 years ago Marcelo Luiz de Laia ▴ 770
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Comment: C: [Limma] M value in contrast test
18.5 years ago Marcelo Luiz de Laia ▴ 770
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3
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786
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[Limma] M value in contrast test
limma limma
updated 18.5 years ago by 65k • written 18.5 years ago by ▴ 770
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740
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[OT] Help to creating a function to automate the plotProfile function in timecourse
TimeCourse timecourse TimeCourse timecourse
updated 18.6 years ago by ▴ 320 • written 18.6 years ago by ▴ 770
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2.9k
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Cannot find xml2-config
updated 18.6 years ago by ★ 7.4k • written 18.6 years ago by ▴ 770
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500
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[OFF TOPIC] Script/Software to prediction of bacterium promoter element
18.6 years ago Marcelo Luiz de Laia ▴ 770
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837
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heatmap and hcluster from limma out put object
Pathways limma Pathways limma
18.7 years ago Marcelo Luiz de Laia ▴ 770
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817
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M value in topTable and Fold Change
GO limma GO limma
18.9 years ago Marcelo Luiz de Laia ▴ 770
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1
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1.1k
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Error installing genefilter
annotate genefilter affy vsn annotate genefilter affy vsn
updated 19.0 years ago by ★ 13k • written 19.0 years ago by ▴ 770
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3
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971
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quality data check
affy vsn limma affy vsn limma
updated 19.0 years ago by 21k • written 19.0 years ago by ▴ 770
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980
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Answer: A: How extract F.p.value and lods values from a eBayes object in limma???
19.1 years ago Marcelo Luiz de Laia ▴ 770
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810
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How extract F.p.value and lods values from a eBayes object in limma???
19.1 years ago Marcelo Luiz de Laia ▴ 770
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1
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781
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lmFit: how method I use in non-Affy single channel
limma limma
updated 19.1 years ago by 50k • written 19.1 years ago by ▴ 770
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1.7k
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Comment: C: loged data or not loged previous to use normalize.quantile
19.1 years ago Marcelo Luiz de Laia ▴ 770
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12
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1.7k
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loged data or not loged previous to use normalize.quantile
limma limma
updated 19.1 years ago by ▴ 90 • written 19.1 years ago by ▴ 770
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702
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affy to normalize others single chanels...
affy limma affy limma
19.2 years ago Marcelo Luiz de Laia ▴ 770
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1.0k
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Answer: A: normalizeQuantiles : log2 or not??
19.2 years ago Marcelo Luiz de Laia ▴ 770
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2
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1.0k
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normalizeQuantiles : log2 or not??
Normalization vsn Normalization vsn
19.2 years ago Marcelo Luiz de Laia ▴ 770
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589
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[limma] How do I do to obtain DE genes in Time CourseExperiments?
Annotation limma Annotation limma
19.2 years ago Marcelo Luiz de Laia ▴ 770
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[limma] How do I do to obtain DE genes in Time Course Experiments?
limma limma
19.2 years ago Marcelo Luiz de Laia ▴ 770
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2
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739
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set geneNames in exprSet object
updated 19.2 years ago by ★ 7.4k • written 19.2 years ago by ▴ 770
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808
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exprSet object help
Biobase affy Biobase affy
19.2 years ago Marcelo Luiz de Laia ▴ 770
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790
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Statistical design help before proceed with biological experiments
19.3 years ago Marcelo Luiz de Laia ▴ 770
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3
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727
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affy to normalize others single chanels...
affy affy
updated 19.3 years ago by ★ 2.3k • written 19.3 years ago by ▴ 770
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521
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[limma] Interpreting B and P values
19.8 years ago Marcelo Luiz de Laia ▴ 770
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0
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690
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Answer: A: how to remove unwanted spots from topTable output?
20.0 years ago Marcelo Luiz de Laia ▴ 770
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0
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569
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Doubt to set layout in limma
20.0 years ago Marcelo Luiz de Laia ▴ 770
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0
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501
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Help in analysis
limma limma
20.1 years ago Marcelo Luiz de Laia ▴ 770
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3
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929
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suggestions of books
updated 20.2 years ago by ▴ 100 • written 20.2 years ago by ▴ 770
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0
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824
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[limma] heatDiagram function doubts
20.3 years ago Marcelo Luiz de Laia ▴ 770
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1
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760
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Contrast, help
updated 20.3 years ago by 21k • written 20.3 years ago by ▴ 770
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860
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Help for analysis a Factorial experiment
20.3 years ago Marcelo Luiz de Laia ▴ 770
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0
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1.0k
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Comment: C: [maNorm] Normalization a complex experiment...
20.3 years ago Marcelo Luiz de Laia ▴ 770
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1
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1.0k
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Comment: C: [maNorm] Normalization a complex experiment...
20.3 years ago Marcelo Luiz de Laia ▴ 770
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4
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1.0k
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[maNorm] Normalization a complex experiment...
Normalization limma marray Normalization limma marray
updated 20.3 years ago by 50k • written 20.3 years ago by ▴ 770
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862
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make a dendrogram, cluster
20.4 years ago Marcelo Luiz de Laia ▴ 770
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0
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815
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Comment: C: Help for make a dendrogram (philogenetic tree)
20.4 years ago Marcelo Luiz de Laia ▴ 770
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2
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815
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Help for make a dendrogram (philogenetic tree)
limma marray limma marray
updated 20.4 years ago by 50k • written 20.4 years ago by ▴ 770
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0
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592
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Help for make a dendrogram (philogenetic tree)
limma marray limma marray
20.4 years ago Marcelo Luiz de Laia ▴ 770
0
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1
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785
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A question about multiple analysis
updated 20.5 years ago by 50k • written 20.5 years ago by ▴ 770
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1
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702
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limma design matrix question
updated 20.5 years ago by 50k • written 20.5 years ago by ▴ 770
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