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Gene Expression Meta Analysis
Microarray Microarray
updated 11.6 years ago by ▴ 20 • written 11.6 years ago by ★ 13k
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4.4k
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error in installing \"genefilter\"
genefilter genefilter
updated 11.6 years ago by 68k • written 11.6 years ago by ★ 13k
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9
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3.5k
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GenomicRanges seqlengths problem
updated 11.6 years ago by ★ 6.8k • written 11.6 years ago by ★ 13k
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9
replies
3.2k
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total count filter cutoff
edgeR edgeR
updated 11.6 years ago by ★ 13k • written 11.6 years ago by ★ 13k
0
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2
replies
2.1k
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RGraphiz installation keeps on failing ubuntu 12.04 LTS server
Rgraphviz Rgraphviz
updated 11.6 years ago by ▴ 10 • written 11.6 years ago by ★ 13k
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1
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2.2k
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how to set up sampleInfo for methylation array in illumina 450K
lumi lumi
updated 11.6 years ago by ▴ 440 • written 11.6 years ago by ★ 13k
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0
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1.4k
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Insignificant q-values in minfi
minfi minfi
11.6 years ago Guest User ★ 13k
0
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0
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894
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Strange error using the \"narrow\" function for a ShortReadQ object
11.6 years ago Guest User ★ 13k
0
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0
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1.7k
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GEOquery/virtualArray package error
Preprocessing hgu95av2 virtualArray Preprocessing hgu95av2 virtualArray
11.6 years ago Guest User ★ 13k
0
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4
replies
3.2k
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EdgeR: dispersion estimation
edgeR edgeR
11.6 years ago Guest User ★ 13k
0
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0
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3.2k
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Answer: A: EdgeR: dispersion estimation
11.6 years ago Guest User ★ 13k
2
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1
reply
2.1k
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Rgraphviz install problem.HELP!!!!!
Rgraphviz Rgraphviz
updated 11.6 years ago by ▴ 30 • written 11.6 years ago by ★ 13k
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0
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1.1k
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Unknown failure in virtualArrayLoadRaw
virtualArray virtualArray
11.6 years ago Guest User ★ 13k
1
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6
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2.6k
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edgeR - paired samples with multifactorial design - errors
RNASeq RNASeq
updated 11.6 years ago by ▴ 200 • written 11.6 years ago by ★ 13k
1
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12
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5.8k
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EdgeR: replicated pools, yes or not?
RNASeq Microarray edgeR RNASeq Microarray edgeR
updated 11.6 years ago by ★ 7.9k • written 11.6 years ago by ★ 13k
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3
replies
4.4k
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unknown error in DiffBind package
ChIPSeq chipseq DiffBind ChIPSeq chipseq DiffBind
updated 11.6 years ago by ★ 5.2k • written 11.6 years ago by ★ 13k
0
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3
replies
2.0k
views
Elephant shark genome
Biostrings genomes Biostrings genomes
updated 11.6 years ago by 25k • written 11.6 years ago by ★ 13k
0
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1
reply
2.9k
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RNA seq
Annotation Annotation
updated 11.6 years ago by ▴ 350 • written 11.6 years ago by ★ 13k
0
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3
replies
1.7k
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The installation of XVector
updated 11.6 years ago by 16k • written 11.6 years ago by ★ 13k
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1
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2.7k
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problem with \"readCufflinks\"
cummeRbund cummeRbund
updated 11.6 years ago by ★ 8.2k • written 11.6 years ago by ★ 13k
0
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8
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2.7k
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limma modeling, paired samples and continuous variable
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
0
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5
replies
3.3k
views
use of voom function with attract package
Pathways GO attract Pathways GO attract
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
0
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1
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4.1k
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logFC and CPM of edgeR
PROcess edgeR PROcess edgeR
updated 11.6 years ago by ★ 13k • written 11.6 years ago by ★ 13k
0
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1
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1.7k
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Rsamtools - summarizeOverlaps - count read on complementary strand
RNASeq RNASeq
updated 11.6 years ago by ▴ 200 • written 11.6 years ago by ★ 13k
0
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2
replies
1.6k
views
Which log2FC to report?
edgeR DESeq DESeq2 edgeR DESeq DESeq2
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
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1
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3.4k
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how to close a hdf5 file
rhdf5 rhdf5
updated 11.6 years ago by ▴ 550 • written 11.6 years ago by ★ 13k
0
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1
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1.3k
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help needed with the design matrix
PROcess edgeR PROcess edgeR
updated 11.6 years ago by 68k • written 11.6 years ago by ★ 13k
0
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3
replies
2.3k
views
older version of org.Hs.eg.db
updated 11.6 years ago by ▴ 210 • written 11.6 years ago by ★ 13k
0
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1
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1.3k
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Error in isVersioned(object)
GUI GUI
updated 11.6 years ago by 25k • written 11.6 years ago by ★ 13k
0
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9
replies
3.7k
views
Rgraphviz compilation error
graph graph
updated 11.6 years ago by ▴ 70 • written 11.6 years ago by ★ 13k
0
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0
replies
778
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singe_sequences.fa.gz file in Bsgenome.Hsapiens.NCBI.GRCh38 is too big
BSgenome BSgenome BSgenome BSgenome
11.6 years ago Guest User ★ 13k
0
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1
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1.3k
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Problem installing latest Bioconductor version
updated 11.6 years ago by ▴ 10 • written 11.6 years ago by ★ 13k
0
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0
replies
994
views
Help with error when trying to run browserView from rtracklayer
11.6 years ago Guest User ★ 13k
2
votes
1
reply
3.2k
views
voom transformed data
Clustering limma Clustering limma
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
0
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0
replies
1.1k
views
Interpretation of fold.changes for covariates in a linear model using voom
RNASeq RNASeq
11.6 years ago Guest User ★ 13k
0
votes
5
replies
4.2k
views
doParallel with Bumphunter gives Error in mcfork()
minfi bumphunter minfi bumphunter
updated 11.6 years ago by ★ 4.2k • written 11.6 years ago by ★ 13k
0
votes
3
replies
1.3k
views
Making three-way and four-way comparisons
edgeR edgeR
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
0
votes
0
replies
1.8k
views
easyRNASeq: Number of total counts
GeneExpression RNASeq Genetics Coverage Normalization BSgenome Biobase Biostrings biomaRt
11.6 years ago Guest User ★ 13k
0
votes
0
replies
625
views
GOSemSim with mgoSim results changed based on the order of input GO terms
GO GO
11.6 years ago Guest User ★ 13k
0
votes
2
replies
1.7k
views
trying to get TeX or LaTeX for R 3.0.3
updated 11.6 years ago by ▴ 310 • written 11.6 years ago by ★ 13k
0
votes
1
reply
1.3k
views
CNV detection using cn.farms for non-affymetrix arrays (custom oligonucleotide arrays)
Sequencing Microarray probe cn.mops Sequencing Microarray probe cn.mops
updated 11.6 years ago by ▴ 210 • written 11.6 years ago by ★ 13k
0
votes
7
replies
1.8k
views
edgeR
edgeR edgeR
updated 5.0 years ago by 53k • written 11.6 years ago by ★ 13k
0
votes
0
replies
827
views
Downloading Multiple Genome Alignments from UCSC Genome Browser
rtracklayer rtracklayer
11.6 years ago Guest User ★ 13k
0
votes
1
reply
2.3k
views
Duplicate gene names after summarization with RMA (hugene.1.0.st.v1)
Annotation PROcess Annotation PROcess
updated 11.6 years ago by 68k • written 11.6 years ago by ★ 13k
0
votes
0
replies
1.2k
views
BiomaRt getBM error: Unknown column
convert biomaRt convert biomaRt
11.6 years ago Guest User ★ 13k
0
votes
2
replies
1.6k
views
EdgeR repeated measurment
miRNA Normalization edgeR miRNA Normalization edgeR
updated 11.6 years ago by 53k • written 11.6 years ago by ★ 13k
0
votes
3
replies
1.4k
views
DESeq2
DESeq2 DESeq2
updated 11.6 years ago by 43k • written 11.6 years ago by ★ 13k
0
votes
0
replies
979
views
Error working with indexes in htf5 files
rhdf5 rhdf5
11.7 years ago Guest User ★ 13k
0
votes
1
reply
1.4k
views
countOverlaps gives an empty SummarizeExperiments
RNASeq Alignment biomaRt rtracklayer DESeq RNASeq Alignment biomaRt rtracklayer DESeq
updated 11.7 years ago by 25k • written 11.7 years ago by ★ 13k
0
votes
1
reply
1.9k
views
Choosing the kernel for SVM (regression) using rminer package
Regression Regression
updated 11.7 years ago by ★ 13k • written 11.7 years ago by ★ 13k
1,206 results • Page 5 of 25
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