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Answer: A: Using custom expected R to estimate LRR with GWASTools
8.3 years ago Stephanie M. Gogarten ▴ 870
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1.7k
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Answer: A: Meaning of NA for LRR and BAF values estimated with GWASTools
8.4 years ago Stephanie M. Gogarten ▴ 870
2
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1.2k
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Answer: A: genotypeToSnpMatrix doesn't handle PL
8.5 years ago Stephanie M. Gogarten ▴ 870
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1.1k
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Comment: C: Distance measure used by snpgdsPCA in SNPRelate
8.5 years ago Stephanie M. Gogarten ▴ 870
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1.2k
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Comment: C: genotypeToSnpMatrix doesn't handle PL
8.5 years ago Stephanie M. Gogarten ▴ 870
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6.1k
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Comment: C: Error in biocLite("BiocUpgrade") when trying to update to latest release
8.6 years ago Stephanie M. Gogarten ▴ 870
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Comment: C: Error in biocLite("BiocUpgrade") when trying to update to latest release
8.6 years ago Stephanie M. Gogarten ▴ 870
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4
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6.1k
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Error in biocLite("BiocUpgrade") when trying to update to latest release
biocinstaller bioclite
updated 8.6 years ago by ★ 8.2k • written 8.6 years ago by ▴ 870
2
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1
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1.6k
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Answer: A: Importing affymetrix genotype calls with GWASTools
8.6 years ago Stephanie M. Gogarten ▴ 870
2
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1.1k
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Answer: A: Error in importing signals with createAffyIntensityFile (GWASTools)
8.6 years ago Stephanie M. Gogarten ▴ 870
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1.1k
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Answer: A: Joint test for interactions in GWASTools
8.6 years ago Stephanie M. Gogarten ▴ 870
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1
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1.8k
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Answer: A: Permutations of GWAS for GWASTools
8.7 years ago Stephanie M. Gogarten ▴ 870
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2
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1.3k
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Can I use rtracklayer to get the sequence surrounding a set of variants?
rtracklayer sequencing reference genome
8.7 years ago Stephanie M. Gogarten ▴ 870
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Answer: A: Can I use rtracklayer to get the sequence surrounding a set of variants?
8.7 years ago Stephanie M. Gogarten ▴ 870
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1
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1.0k
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rtracklayer browseGenome error with named ranges
rtracklayer
updated 8.7 years ago by ★ 11k • written 8.7 years ago by ▴ 870
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1.2k
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Answer: A: Extracting first member of each element of a matrix of lists
9.0 years ago Stephanie M. Gogarten ▴ 870
2
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1.8k
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Answer: A: PLINK features available in GWASTools?
9.0 years ago Stephanie M. Gogarten ▴ 870
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1
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1.8k
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PLINK features available in GWASTools?
gwastools
9.0 years ago Stephanie M. Gogarten ▴ 870
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1.6k
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Answer: A: GWASTools assocTestCPH on cluster vs. computer
9.3 years ago Stephanie M. Gogarten ▴ 870
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1.7k
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Comment: C: Memory usage in readVcf from VariantAnnotation
9.4 years ago Stephanie M. Gogarten ▴ 870
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1.6k
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Answer: A: GWASTools assocTestCPH on cluster vs. computer
9.4 years ago Stephanie M. Gogarten ▴ 870
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1
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1.6k
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Comment: C: GWASTools assocTestCPH on cluster vs. computer
9.5 years ago Stephanie M. Gogarten ▴ 870
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1.5k
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Answer: A: Errors when attempting to run association tests in GWASTools
9.5 years ago Stephanie M. Gogarten ▴ 870
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0
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1000
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Answer: A: GWASTools: quasi-/perfect linear separation
9.7 years ago Stephanie M. Gogarten ▴ 870
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1
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1.3k
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Answer: A: GWASTools: assocTestRegression, forcing the analysis to use reference allele
9.7 years ago Stephanie M. Gogarten ▴ 870
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0
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2.5k
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Answer: A: help with analysis of genotyping data from Illumina HumanOmni5-4v1_B chip
9.9 years ago Stephanie M. Gogarten ▴ 870
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1
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1.8k
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Answer: A: GWAS with family data
10.1 years ago Stephanie M. Gogarten ▴ 870
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1
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1.3k
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Comment: C: GWASdata
10.1 years ago Stephanie M. Gogarten ▴ 870
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1
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1.2k
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Comment: C: VariantAnnotation - extracting AD and PL fields
10.1 years ago Stephanie M. Gogarten ▴ 870
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1
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2.0k
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Answer: A: help with analysis of genotyping data from Illumina HumanOmni5-4v1_B chip
10.3 years ago Stephanie M. Gogarten ▴ 870
0
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0
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1.2k
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Fwd: GWASTools
cdf convert GWASTools cdf convert GWASTools
10.3 years ago Stephanie M. Gogarten ▴ 870
0
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0
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926
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Job opening: Research Scientist in Biostatistics (Seattle, WA)
Genetics Genetics
10.4 years ago Stephanie M. Gogarten ▴ 870
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958
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Answer: A: GWASTools suggestions: explicit interface for GenotypeReaders,
10.4 years ago Stephanie M. Gogarten ▴ 870
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1.8k
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snpStats/GWASTools conversion
cdf convert snpMatrix snpStats GWASTools cdf convert snpMatrix snpStats GWASTools
10.6 years ago Stephanie M. Gogarten ▴ 870
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1
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1.0k
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Answer: A: Formatting in R
10.6 years ago Stephanie M. Gogarten ▴ 870
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1
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2.2k
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GWASTools
cdf GWASTools cdf GWASTools
10.7 years ago Stephanie M. Gogarten ▴ 870
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0
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2.2k
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Answer: A: GWASTools
10.7 years ago Stephanie M. Gogarten ▴ 870
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0
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1.4k
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Answer: A: GWATools use in creating ncdf files
10.8 years ago Stephanie M. Gogarten ▴ 870
0
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2
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1.4k
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Gviz error with collapseTranscripts=TRUE
GO Gviz GO Gviz
updated 10.9 years ago by ★ 1.6k • written 10.9 years ago by ▴ 870
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1
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1.7k
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Comment: C: GWATools use in creating ncdf files
10.9 years ago Stephanie M. Gogarten ▴ 870
0
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1
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1.7k
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Comment: C: GWATools use in creating ncdf files
10.9 years ago Stephanie M. Gogarten ▴ 870
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5
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1.7k
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GWATools use in creating ncdf files
SNP Annotation cdf GWASTools SNP Annotation cdf GWASTools
updated 10.9 years ago by ▴ 60 • written 10.9 years ago by ▴ 870
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3
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1.4k
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GWATools use in creating ncdf files
SNP cdf GWASTools SNP cdf GWASTools
updated 10.9 years ago by ▴ 60 • written 10.9 years ago by ▴ 870
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0
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1.4k
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Answer: A: GWATools use in creating ncdf files
10.9 years ago Stephanie M. Gogarten ▴ 870
0
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1
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3.7k
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Comment: C: how to convert genotype snp matrix to nucleotide genotypes?
11.0 years ago Stephanie M. Gogarten ▴ 870
0
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3
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2.5k
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Affymetrix CEL files
cdf GWASTools cdf GWASTools
updated 11.0 years ago by 65k • written 11.0 years ago by ▴ 870
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0
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877
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GWATools use in creating ncdf files
cdf GWASTools cdf GWASTools
11.0 years ago Stephanie M. Gogarten ▴ 870
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1
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2.9k
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Answer: A: Error installing impute package
11.1 years ago Stephanie M. Gogarten ▴ 870
0
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0
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1.9k
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GWASTools
Organism GWASTools Organism GWASTools SNPRelate
11.1 years ago Stephanie M. Gogarten ▴ 870
0
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0
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1.2k
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A question about GWASTools package
cdf GWASTools cdf GWASTools
11.1 years ago Stephanie M. Gogarten ▴ 870
161 results • Page 3 of 4
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