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Comment: C: Compute test-score statistical significance using control-scores from shuffled p
9.6 years ago Bade ▴ 310
0
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2
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1.6k
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Compute test-score statistical significance using control-scores from shuffled population
statistics hypotheses R
9.6 years ago Bade ▴ 310
0
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0
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2.2k
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Clustering sequence on similarity using percentage identity matrix
alignment clustering
10.3 years ago Bade ▴ 310
5
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2
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2.2k
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How to get genes within a GO category of 'GOstat' results?
GO
updated 10.8 years ago by 53k • written 11.1 years ago by ▴ 310
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0
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3.0k
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Comment: A: Two-class unpaired test using LIMMA
updated 10.9 years ago by 53k • written 10.9 years ago by ▴ 310
0
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0
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3.0k
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Comment: C: Two-class unpaired test using LIMMA
10.9 years ago Bade ▴ 310
4
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4
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3.0k
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Two-class unpaired test using LIMMA
Limma SAM differential expression
updated 10.9 years ago by 68k • written 10.9 years ago by ▴ 310
0
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0
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993
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Comment: C: Combing Effects (t-stats) from experiment with common reference design?
11.1 years ago Bade ▴ 310
0
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2
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993
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Combing Effects (t-stats) from experiment with common reference design?
updated 11.1 years ago by ★ 7.9k • written 11.1 years ago by ▴ 310
0
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1
reply
3.4k
views
Error while mapping SYMBOLS to ENTREZID
updated 11.2 years ago by 25k • written 11.2 years ago by ▴ 310
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0
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3.9k
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Comment: C: Calculate BCV in edgeR - sample without replicates
11.8 years ago Bade ▴ 310
0
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1
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3.9k
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Comment: C: Calculate BCV in edgeR - sample without replicates
11.8 years ago Bade ▴ 310
0
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4
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3.9k
views
Calculate BCV in edgeR - sample without replicates
edgeR edgeR
updated 11.8 years ago by ★ 7.9k • written 11.8 years ago by ▴ 310
0
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0
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987
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Scaling sRNA/degradome libraries - edgeR
11.8 years ago Bade ▴ 310
0
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0
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1.5k
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Annotating Results for HuEx 1.0 STv2 - Oligo
annotate oligo annotate oligo
12.1 years ago Bade ▴ 310
0
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0
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4.9k
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Comment: C: Problem reading Cel files - Oligo Package
12.1 years ago Bade ▴ 310
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4
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4.9k
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Problem reading Cel files - Oligo Package
Annotation oligo Annotation oligo
updated 12.1 years ago by 68k • written 12.1 years ago by ▴ 310
0
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0
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1.2k
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Suggestion - gene set enrichment of genes against BP and Disease gene sets
Microarray PROcess Microarray PROcess
12.2 years ago Bade ▴ 310
0
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0
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918
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Comment: C: Problem with decideTests - No p-val correction
12.2 years ago Bade ▴ 310
0
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2
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918
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Problem with decideTests - No p-val correction
GO GO
updated 12.2 years ago by 68k • written 12.2 years ago by ▴ 310
0
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0
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984
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Answer: A: why could I only get two different expressed genes by Limma?
12.3 years ago Bade ▴ 310
0
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3
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8.2k
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Covariate for batch effect removal by ComBat
updated 4.4 years ago by • 0 • written 12.3 years ago by ▴ 310
1
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0
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9.2k
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Answer: A: topTable coefficient
12.3 years ago Bade ▴ 310
0
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0
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1.2k
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Covariate for batch effect removal by ComBat with attachment
12.3 years ago Bade ▴ 310
0
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0
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1.4k
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virtualArray package - Error while combing data sets
Preprocessing virtualArray Preprocessing virtualArray
12.4 years ago Bade ▴ 310
0
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0
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935
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No consensus among samples when sorted with t-stats - Need Help
Normalization Normalization
12.4 years ago Bade ▴ 310
0
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0
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1.4k
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virtualArray package - Error while combing data sets
Preprocessing virtualArray Preprocessing virtualArray
12.4 years ago Bade ▴ 310
0
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0
replies
989
views
Answer: A: Limma/Affy - Include expression Intensity in Final 'decideTests' results
12.4 years ago Bade ▴ 310
0
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1
reply
1.7k
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Comment: C: Limma/Affy - Include expression Intensity in Final 'decideTests' results
12.4 years ago Bade ▴ 310
0
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0
replies
885
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Lumi/Limma - Get nuIDs and expression intensities in result
limma limma
12.4 years ago Bade ▴ 310
0
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1
reply
1.7k
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Comment: C: Limma/Affy - Include expression Intensity in Final 'decideTests' results
12.4 years ago Bade ▴ 310
0
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7
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1.7k
views
Limma/Affy - Include expression Intensity in Final 'decideTests' results
updated 12.5 years ago by 68k • written 12.5 years ago by ▴ 310
0
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4
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1.6k
views
Lumi problem - 'Annotation columns not available'
Microarray GO illuminaMousev1 Microarray GO illuminaMousev1
updated 12.5 years ago by ▴ 440 • written 12.5 years ago by ▴ 310
0
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1
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1.6k
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Comment: C: Lumi problem - 'Annotation columns not available'
12.5 years ago Bade ▴ 310
0
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0
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2.3k
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Comment: C: Problem with Limma - Possible Limma/affy bug - minimal code not working
12.5 years ago Bade ▴ 310
0
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1
reply
2.3k
views
Comment: C: Problem with Limma - Possible Limma/affy bug - minimal code not working
12.5 years ago Bade ▴ 310
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