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Comment: C: Compute test-score statistical significance using control-scores from shuffled p
8.1 years ago Bade ▴ 310
0
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2
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1.3k
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Compute test-score statistical significance using control-scores from shuffled population
statistics hypotheses R
8.1 years ago Bade ▴ 310
0
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0
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1.8k
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Clustering sequence on similarity using percentage identity matrix
alignment clustering
8.8 years ago Bade ▴ 310
5
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2
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1.8k
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How to get genes within a GO category of 'GOstat' results?
GO
updated 9.3 years ago by 50k • written 9.6 years ago by ▴ 310
0
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0
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2.5k
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Comment: A: Two-class unpaired test using LIMMA
updated 9.4 years ago by 50k • written 9.4 years ago by ▴ 310
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0
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2.5k
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Comment: C: Two-class unpaired test using LIMMA
9.4 years ago Bade ▴ 310
4
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4
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2.5k
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Two-class unpaired test using LIMMA
Limma SAM differential expression
updated 9.4 years ago by 65k • written 9.4 years ago by ▴ 310
0
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0
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773
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Comment: C: Combing Effects (t-stats) from experiment with common reference design?
9.7 years ago Bade ▴ 310
0
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2
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773
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Combing Effects (t-stats) from experiment with common reference design?
updated 9.7 years ago by ★ 7.9k • written 9.7 years ago by ▴ 310
0
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1
reply
2.9k
views
Error while mapping SYMBOLS to ENTREZID
updated 9.7 years ago by 25k • written 9.7 years ago by ▴ 310
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0
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3.1k
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Comment: C: Calculate BCV in edgeR - sample without replicates
10.4 years ago Bade ▴ 310
0
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1
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3.1k
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Comment: C: Calculate BCV in edgeR - sample without replicates
10.4 years ago Bade ▴ 310
0
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4
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3.1k
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Calculate BCV in edgeR - sample without replicates
edgeR edgeR
updated 10.4 years ago by ★ 7.9k • written 10.4 years ago by ▴ 310
0
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0
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817
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Scaling sRNA/degradome libraries - edgeR
10.4 years ago Bade ▴ 310
0
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0
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1.3k
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Annotating Results for HuEx 1.0 STv2 - Oligo
annotate oligo annotate oligo
10.7 years ago Bade ▴ 310
0
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0
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4.1k
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Comment: C: Problem reading Cel files - Oligo Package
10.7 years ago Bade ▴ 310
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4
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4.1k
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Problem reading Cel files - Oligo Package
Annotation oligo Annotation oligo
updated 10.7 years ago by 65k • written 10.7 years ago by ▴ 310
0
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0
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973
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Suggestion - gene set enrichment of genes against BP and Disease gene sets
Microarray PROcess Microarray PROcess
10.8 years ago Bade ▴ 310
0
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0
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700
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Comment: C: Problem with decideTests - No p-val correction
10.8 years ago Bade ▴ 310
0
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2
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700
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Problem with decideTests - No p-val correction
GO GO
updated 10.8 years ago by 65k • written 10.8 years ago by ▴ 310
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0
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784
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Answer: A: why could I only get two different expressed genes by Limma?
10.9 years ago Bade ▴ 310
0
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3
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7.3k
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Covariate for batch effect removal by ComBat
updated 3.0 years ago by • 0 • written 10.9 years ago by ▴ 310
1
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0
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8.3k
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Answer: A: topTable coefficient
10.9 years ago Bade ▴ 310
0
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0
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976
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Covariate for batch effect removal by ComBat with attachment
10.9 years ago Bade ▴ 310
0
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0
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1.2k
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virtualArray package - Error while combing data sets
Preprocessing virtualArray Preprocessing virtualArray
10.9 years ago Bade ▴ 310
0
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0
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747
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No consensus among samples when sorted with t-stats - Need Help
Normalization Normalization
10.9 years ago Bade ▴ 310
0
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0
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1.1k
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virtualArray package - Error while combing data sets
Preprocessing virtualArray Preprocessing virtualArray
10.9 years ago Bade ▴ 310
0
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0
replies
735
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Answer: A: Limma/Affy - Include expression Intensity in Final 'decideTests' results
11.0 years ago Bade ▴ 310
0
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1
reply
1.3k
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Comment: C: Limma/Affy - Include expression Intensity in Final 'decideTests' results
11.0 years ago Bade ▴ 310
0
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0
replies
728
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Lumi/Limma - Get nuIDs and expression intensities in result
limma limma
11.0 years ago Bade ▴ 310
0
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1
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1.3k
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Comment: C: Limma/Affy - Include expression Intensity in Final 'decideTests' results
11.0 years ago Bade ▴ 310
0
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7
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1.3k
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Limma/Affy - Include expression Intensity in Final 'decideTests' results
updated 11.0 years ago by 65k • written 11.0 years ago by ▴ 310
0
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4
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1.2k
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Lumi problem - 'Annotation columns not available'
Microarray GO illuminaMousev1 Microarray GO illuminaMousev1
updated 11.0 years ago by ▴ 440 • written 11.0 years ago by ▴ 310
0
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1
reply
1.2k
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Comment: C: Lumi problem - 'Annotation columns not available'
11.0 years ago Bade ▴ 310
0
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0
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1.9k
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Comment: C: Problem with Limma - Possible Limma/affy bug - minimal code not working
11.1 years ago Bade ▴ 310
0
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1
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1.9k
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Comment: C: Problem with Limma - Possible Limma/affy bug - minimal code not working
11.1 years ago Bade ▴ 310
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