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0
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0
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1.4k
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Comment:
C: Compute test-score statistical significance using control-scores from shuffled p
8.7 years ago
Bade
▴ 310
0
votes
2
replies
1.4k
views
Compute test-score statistical significance using control-scores from shuffled population
statistics
hypotheses
R
8.7 years ago
Bade
▴ 310
0
votes
0
replies
1.9k
views
Clustering sequence on similarity using percentage identity matrix
alignment
clustering
9.5 years ago
Bade
▴ 310
5
votes
2
replies
2.0k
views
How to get genes within a GO category of 'GOstat' results?
GO
updated 9.9 years ago by
Gordon Smyth
52k • written 10.3 years ago by
Bade
▴ 310
0
votes
0
replies
2.7k
views
Comment:
A: Two-class unpaired test using LIMMA
updated 10.1 years ago by
Gordon Smyth
52k • written 10.1 years ago by
Bade
▴ 310
0
votes
0
replies
2.7k
views
Comment:
C: Two-class unpaired test using LIMMA
10.1 years ago
Bade
▴ 310
4
votes
4
replies
2.7k
views
Two-class unpaired test using LIMMA
Limma
SAM
differential expression
updated 10.1 years ago by
James W. MacDonald
67k • written 10.1 years ago by
Bade
▴ 310
0
votes
0
replies
881
views
Comment:
C: Combing Effects (t-stats) from experiment with common reference design?
10.3 years ago
Bade
▴ 310
0
votes
2
replies
881
views
Combing Effects (t-stats) from experiment with common reference design?
updated 10.3 years ago by
Ryan C. Thompson
★ 7.9k • written 10.3 years ago by
Bade
▴ 310
0
votes
1
reply
3.2k
views
Error while mapping SYMBOLS to ENTREZID
updated 10.3 years ago by
Martin Morgan
25k • written 10.3 years ago by
Bade
▴ 310
0
votes
0
replies
3.5k
views
Comment:
C: Calculate BCV in edgeR - sample without replicates
11.0 years ago
Bade
▴ 310
0
votes
1
reply
3.5k
views
Comment:
C: Calculate BCV in edgeR - sample without replicates
11.0 years ago
Bade
▴ 310
0
votes
4
replies
3.5k
views
Calculate BCV in edgeR - sample without replicates
edgeR
edgeR
updated 11.0 years ago by
Ryan C. Thompson
★ 7.9k • written 11.0 years ago by
Bade
▴ 310
0
votes
0
replies
905
views
Scaling sRNA/degradome libraries - edgeR
11.0 years ago
Bade
▴ 310
0
votes
0
replies
1.4k
views
Annotating Results for HuEx 1.0 STv2 - Oligo
annotate
oligo
annotate
oligo
11.3 years ago
Bade
▴ 310
0
votes
0
replies
4.5k
views
Comment:
C: Problem reading Cel files - Oligo Package
11.3 years ago
Bade
▴ 310
0
votes
4
replies
4.5k
views
Problem reading Cel files - Oligo Package
Annotation
oligo
Annotation
oligo
updated 11.3 years ago by
James W. MacDonald
67k • written 11.3 years ago by
Bade
▴ 310
0
votes
0
replies
1.1k
views
Suggestion - gene set enrichment of genes against BP and Disease gene sets
Microarray
PROcess
Microarray
PROcess
11.4 years ago
Bade
▴ 310
0
votes
0
replies
812
views
Comment:
C: Problem with decideTests - No p-val correction
11.4 years ago
Bade
▴ 310
0
votes
2
replies
812
views
Problem with decideTests - No p-val correction
GO
GO
updated 11.4 years ago by
James W. MacDonald
67k • written 11.4 years ago by
Bade
▴ 310
0
votes
0
replies
882
views
Answer:
A: why could I only get two different expressed genes by Limma?
11.5 years ago
Bade
▴ 310
0
votes
3
replies
7.8k
views
Covariate for batch effect removal by ComBat
updated 3.6 years ago by
Josh
• 0 • written 11.5 years ago by
Bade
▴ 310
1
vote
0
replies
8.8k
views
Answer:
A: topTable coefficient
11.5 years ago
Bade
▴ 310
0
votes
0
replies
1.1k
views
Covariate for batch effect removal by ComBat with attachment
11.5 years ago
Bade
▴ 310
0
votes
0
replies
1.3k
views
virtualArray package - Error while combing data sets
Preprocessing
virtualArray
Preprocessing
virtualArray
11.5 years ago
Bade
▴ 310
0
votes
0
replies
846
views
No consensus among samples when sorted with t-stats - Need Help
Normalization
Normalization
11.5 years ago
Bade
▴ 310
0
votes
0
replies
1.3k
views
virtualArray package - Error while combing data sets
Preprocessing
virtualArray
Preprocessing
virtualArray
11.5 years ago
Bade
▴ 310
0
votes
0
replies
883
views
Answer:
A: Limma/Affy - Include expression Intensity in Final 'decideTests' results
11.6 years ago
Bade
▴ 310
0
votes
1
reply
1.5k
views
Comment:
C: Limma/Affy - Include expression Intensity in Final 'decideTests' results
11.6 years ago
Bade
▴ 310
0
votes
0
replies
813
views
Lumi/Limma - Get nuIDs and expression intensities in result
limma
limma
11.6 years ago
Bade
▴ 310
0
votes
1
reply
1.5k
views
Comment:
C: Limma/Affy - Include expression Intensity in Final 'decideTests' results
11.6 years ago
Bade
▴ 310
0
votes
7
replies
1.5k
views
Limma/Affy - Include expression Intensity in Final 'decideTests' results
updated 11.6 years ago by
James W. MacDonald
67k • written 11.6 years ago by
Bade
▴ 310
0
votes
4
replies
1.4k
views
Lumi problem - 'Annotation columns not available'
Microarray
GO
illuminaMousev1
Microarray
GO
illuminaMousev1
updated 11.6 years ago by
Pan Du
▴ 440 • written 11.7 years ago by
Bade
▴ 310
0
votes
1
reply
1.4k
views
Comment:
C: Lumi problem - 'Annotation columns not available'
11.6 years ago
Bade
▴ 310
0
votes
0
replies
2.1k
views
Comment:
C: Problem with Limma - Possible Limma/affy bug - minimal code not working
11.7 years ago
Bade
▴ 310
0
votes
1
reply
2.1k
views
Comment:
C: Problem with Limma - Possible Limma/affy bug - minimal code not working
11.7 years ago
Bade
▴ 310
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