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2
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2
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301
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Automatically generate contrasts from a model matrix / formula
limma
updated 7 weeks ago by ★ 4.6k • written 7 weeks ago by ▴ 10
0
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0
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1.0k
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Comment: Comment: FilterByExpr low counts with small sample size
7 months ago Jonathan ▴ 10
0
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1
reply
1.0k
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Comment: Comment: FilterByExpr low counts with small sample size
7 months ago Jonathan ▴ 10
4
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6
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1.0k
views
FilterByExpr low counts with small sample size
edgeR
7 months ago Jonathan ▴ 10
0
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0
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1.0k
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Comment: Comment: FilterByExpr low counts with small sample size
7 months ago Jonathan ▴ 10
0
votes
1
reply
2.0k
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Comment: Comment: Batch correction and repeated measures
8 months ago Jonathan ▴ 10
0
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1
reply
2.0k
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Comment: Comment: Batch correction and repeated measures
14 months ago Jonathan ▴ 10
0
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1
reply
2.0k
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Comment: Comment: Batch correction and repeated measures
14 months ago Jonathan ▴ 10
0
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1
reply
2.0k
views
Comment: Comment: Batch correction and repeated measures
14 months ago Jonathan ▴ 10
5
votes
9
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2.0k
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Batch correction and repeated measures
RUVSeq sva limma
updated 7 months ago by 52k • written 14 months ago by ▴ 10
0
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0
replies
463
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Huge effect of a single sample on DEGs
limma
14 months ago Jonathan ▴ 10
0
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1
reply
1.2k
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Comment: Comment: Phenotype effect - building a contrast matrix - grouping vs interaction
14 months ago Jonathan ▴ 10
0
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1
reply
1.2k
views
Comment: Comment: Phenotype effect - building a contrast matrix - grouping vs interaction
15 months ago Jonathan ▴ 10
4
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5
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1.2k
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Phenotype effect - building a contrast matrix - grouping vs interaction
limma
updated 14 months ago by 52k • written 15 months ago by ▴ 10
0
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1
reply
1.1k
views
Comment: Comment: Adding a group of samples reduces DEGs in other groups
16 months ago Jonathan ▴ 10
0
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1
reply
1.1k
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Comment: Comment: Adding a group of samples reduces DEGs in other groups
16 months ago Jonathan ▴ 10
6
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7
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1.1k
views
Adding a group of samples reduces DEGs in other groups
RNASeq limma
updated 16 months ago by 52k • written 16 months ago by ▴ 10
0
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0
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1.4k
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Comment: Comment: Limma multi-group, nested analysis with aggregation
16 months ago Jonathan ▴ 10
0
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0
replies
1.1k
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Comment: Comment: Adding a group of samples reduces DEGs in other groups
16 months ago Jonathan ▴ 10
2
votes
1
reply
999
views
Grouping DEGs yields varying results
RNASeq limma
updated 16 months ago by 52k • written 16 months ago by ▴ 10
4
votes
2
replies
2.1k
views
Gene set analysis: GSVA, Z-Score, and fold-changes
GSVA RNASeq limma
updated 17 months ago by 52k • written 17 months ago by ▴ 10
0
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1
reply
1.4k
views
Comment: Comment: Limma multi-group, nested analysis with aggregation
19 months ago Jonathan ▴ 10
0
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4
replies
1.4k
views
Limma multi-group, nested analysis with aggregation
limma
19 months ago • updated 16 months ago Jonathan ▴ 10
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