Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
2.2k
views
Comment: C: ComBat: Adjustment for 3experimental variables
8.5 years ago chris86 ▴ 420
0
votes
0
replies
1.6k
views
Comment: C: analysing continuous variable with limma and correcting for covariates
8.5 years ago chris86 ▴ 420
2
votes
2
replies
1.6k
views
analysing continuous variable with limma and correcting for covariates
limma microarray
updated 8.5 years ago by 67k • written 8.5 years ago by ▴ 420
0
votes
0
replies
1.4k
views
Answer: A: Appropriate input of merged datasets regarding batch effect correction with ComB
8.5 years ago chris86 ▴ 420
0
votes
1
reply
2.2k
views
Comment: C: ComBat: Adjustment for 3experimental variables
8.5 years ago chris86 ▴ 420
2
votes
1
reply
624
views
illuminaHumanv4.db versus illuminaHumanv2.db beadchip annotation differences
limma microarray
updated 8.5 years ago by 67k • written 8.5 years ago by ▴ 420
0
votes
0
replies
1.2k
views
Answer: A: Normalizing RNA-Seq data without replicates.
8.6 years ago chris86 ▴ 420
0
votes
1
reply
4.7k
views
Comment: C: Differential expression analysis of already normalized sequence counts
8.6 years ago chris86 ▴ 420
4
votes
1
reply
743
views
How to fit a regression for a time series array experiment with limma?
limma microarray
updated 8.6 years ago by 67k • written 8.6 years ago by ▴ 420
1
vote
0
replies
1.0k
views
Comment: C: design matrix for dge
8.6 years ago chris86 ▴ 420
0
votes
0
replies
769
views
Comment: C: Best approach to analyse this time series experiment
8.6 years ago chris86 ▴ 420
1
vote
2
replies
769
views
Best approach to analyse this time series experiment
microarray
updated 8.6 years ago by 52k • written 8.6 years ago by ▴ 420
1
vote
0
replies
2.3k
views
Comment: C: Can I calculate counts from the base mean and log2fc outputs of DESeq2? Also, c
8.6 years ago chris86 ▴ 420
2
votes
1
reply
980
views
Meta analysis of healthy and diseased data using illumina microarrays
normalization
updated 8.6 years ago by ▴ 150 • written 8.6 years ago by ▴ 420
0
votes
2
replies
1.2k
views
Why are these two clustering patterns different?
bioconductor
updated 8.6 years ago by ▴ 510 • written 8.6 years ago by ▴ 420
0
votes
1
reply
2.6k
views
Comment: C: Apply the plotPCA function in DESeq2 package to quantitative MS-based data
8.6 years ago chris86 ▴ 420
1
vote
1
reply
2.6k
views
Answer: A: Apply the plotPCA function in DESeq2 package to quantitative MS-based data
8.6 years ago chris86 ▴ 420
0
votes
0
replies
2.8k
views
Comment: C: Annotation in ExpressionSet object
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.8k
views
Answer: A: Annotation in ExpressionSet object
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.2k
views
Comment: C: Combining data from multiple illumina microarray experiments
8.7 years ago chris86 ▴ 420
0
votes
0
replies
2.2k
views
Comment: C: Combining data from multiple illumina microarray experiments
8.7 years ago chris86 ▴ 420
3
votes
10
replies
2.2k
views
Combining data from multiple illumina microarray experiments
normalization limma
updated 8.7 years ago by 52k • written 8.7 years ago by ▴ 420
0
votes
0
replies
2.2k
views
Comment: C: Combining data from multiple illumina microarray experiments
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.2k
views
Comment: C: Combining data from multiple illumina microarray experiments
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.2k
views
Comment: C: Combining data from multiple illumina microarray experiments
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.5k
views
Comment: C: microarray data analsis with limma?
8.7 years ago chris86 ▴ 420
0
votes
0
replies
2.9k
views
Comment: C: Is this the correct way of doing a paired t-test in limma using contrasts
8.7 years ago chris86 ▴ 420
0
votes
1
reply
1.1k
views
Comment: C: design matrix for a 2 groups
8.7 years ago chris86 ▴ 420
1
vote
1
reply
1.1k
views
Answer: A: design matrix for a 2 groups
8.7 years ago chris86 ▴ 420
0
votes
0
replies
1.1k
views
Comment: C: What are the expression value of genes/probes in limma results of topTable
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.9k
views
Answer: A: Is this the correct way of doing a paired t-test in limma using contrasts
8.7 years ago chris86 ▴ 420
5
votes
5
replies
2.9k
views
Is this the correct way of doing a paired t-test in limma using contrasts
limma
8.7 years ago chris86 ▴ 420
2
votes
1
reply
1.0k
views
Answer: A: How to calculate design matrix and conduct moderate t test to find DEGs
8.7 years ago chris86 ▴ 420
0
votes
0
replies
1.9k
views
Answer: A: lumi package impossible to install - xtable library
8.7 years ago chris86 ▴ 420
1
vote
0
replies
2.3k
views
Comment: C: Understanding the output of the exprs() function
8.7 years ago chris86 ▴ 420
0
votes
1
reply
2.3k
views
Comment: C: Understanding the output of the exprs() function
8.7 years ago chris86 ▴ 420
1
vote
0
replies
1.7k
views
Comment: C: comBat/SVA with no "variable of interest" and two batches
8.7 years ago chris86 ▴ 420
0
votes
0
replies
932
views
Comment: C: How to do contrasts in CAMERA/ROMER/ROAST/etc in Limma?
8.7 years ago chris86 ▴ 420
3
votes
2
replies
932
views
How to do contrasts in CAMERA/ROMER/ROAST/etc in Limma?
limma
updated 8.7 years ago by ★ 28k • written 8.7 years ago by ▴ 420
1
vote
1
reply
1.7k
views
Answer: A: comBat/SVA with no "variable of interest" and two batches
8.7 years ago chris86 ▴ 420
0
votes
1
reply
1.4k
views
Answer: A: How to compute Gene Regulatory Network on microarraay data
8.7 years ago chris86 ▴ 420
0
votes
0
replies
1.1k
views
Answer: A: How to compute Microarray gene interaction
8.7 years ago chris86 ▴ 420
1
vote
1
reply
5.5k
views
Comment: C: Heatmap of a subset of genes
8.7 years ago chris86 ▴ 420
0
votes
1
reply
5.5k
views
Comment: C: Heatmap of a subset of genes
8.7 years ago chris86 ▴ 420
1
vote
1
reply
5.5k
views
Answer: A: Heatmap of a subset of genes
8.8 years ago chris86 ▴ 420
0
votes
0
replies
2.7k
views
Comment: C: Complexheatmap question on sorting columns
8.8 years ago chris86 ▴ 420
0
votes
0
replies
895
views
Comment: C: Using p.nominal DE genes from limma
8.8 years ago chris86 ▴ 420
0
votes
0
replies
895
views
Comment: C: Using p.nominal DE genes from limma
8.8 years ago chris86 ▴ 420
5
votes
5
replies
895
views
Using p.nominal DE genes from limma
limma
updated 8.8 years ago by ▴ 370 • written 8.8 years ago by ▴ 420
2
votes
1
reply
1.7k
views
Answer: A: Co-expression between host and pathogen genes
8.8 years ago chris86 ▴ 420
179 results • Page 3 of 4
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6