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following contributors:
5 years, 3 months ago
United States
difference among tximport scaledTPM, lengthScaledTPM and the original TPM output by salmon/kallisto
5 years, 4 months ago
United States
difference among tximport scaledTPM, lengthScaledTPM and the original TPM output by salmon/kallisto
5 years, 10 months ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
5 years, 10 months ago
United States
[DESeq2] time series strain-specific differences over time
5 years, 10 months ago
United States
Deseq2: RNA-seq and Negative binomial distribution
5 years, 10 months ago
Seattle, WA, United States
resize (shrink/expand) GenomicRanges
5 years, 10 months ago
United States
difference among tximport scaledTPM, lengthScaledTPM and the original TPM output by salmon/kallisto
5 years, 10 months ago
EMBL Heidelberg
Error: Bioconductor version '3.8' requires R version '3.5'
5 years, 10 months ago
The city by the bay
cameraPR vs geneSetTest and ROAST/CAMERA in general
5 years, 10 months ago
The city by the bay
goana limma- extract list of DE genes and genes in the enriched GO terms?
5 years, 10 months ago
United States
Best way to convert uniprot accessions to entrez gene identifiers in R
5 years, 10 months ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
5 years, 10 months ago
Germany
Plot ggplot2 and ggbio Images Together
5 years, 10 months ago
Italy
How to map all Ensembl IDs to Gene Symbols- Problem with AnootationDbi
5 years, 10 months ago
United States
WGCNA - Signed vs signed hybrid networks
5 years, 10 months ago
United States
difference among tximport scaledTPM, lengthScaledTPM and the original TPM output by salmon/kallisto
5 years, 11 months ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
6 years ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
6 years ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
6 years ago
Icahn School of Medicine at Mount Sinai…
Batch correction in DESeq2
6 years ago
Seattle, WA, United States
how to extract "Gene type" from org.Mm.eg.db?
6 years, 1 month ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
6 years, 1 month ago
WEHI, Melbourne, Australia
How barcode-plot enrichment is calculated?
6 years, 1 month ago
The city by the bay
Is Limma's removeBatchEffect() and log2() commutative?
6 years, 1 month ago
The city by the bay
goana limma- extract list of DE genes and genes in the enriched GO terms?
6 years, 2 months ago
United Kingdom
biomaRt: no access to Ensembl_75 (GRCh37.p13)
6 years, 2 months ago
WEHI, Melbourne, Australia
conceptual question about FDR, FDR adjusted p-value and q-value
6 years, 3 months ago
United States
difference among tximport scaledTPM, lengthScaledTPM and the original TPM output by salmon/kallisto
6 years, 3 months ago
The city by the bay
Is Limma's removeBatchEffect() and log2() commutative?
6 years, 3 months ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
6 years, 3 months ago
United Kingdom / London / Francis Crick…
extracting the genes associated with the clusters
6 years, 3 months ago
The city by the bay
Is Limma's removeBatchEffect() and log2() commutative?
6 years, 3 months ago
The city by the bay
goana limma- extract list of DE genes and genes in the enriched GO terms?
6 years, 6 months ago
United States
Error in GRanges: could not find symbol "recursive" in environment of the generic function
6 years, 6 months ago
The city by the bay
Continuous variable interaction with Groups in design matrix
6 years, 6 months ago
The city by the bay
Is Limma's removeBatchEffect() and log2() commutative?
6 years, 6 months ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
7 years, 5 months ago
United States
Best method/package for Gene Set Enrichment Analysis in microarrays?
7 years, 5 months ago
The city by the bay
Continuous variable interaction with Groups in design matrix
7 years, 5 months ago
The city by the bay
limma Time Course Experiment with many time points
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