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Comment: Normalizing batch effects using technical replicates for DGE analysis between tw
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yinhjk602
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https://sprunkiphase4.net/
Sprunki Phase 4 is the latest update in the music rhythm game, offering new beats, characters, and challenges. Y…
Comment: Cross-validation with multiple control subgroups in limma
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Ali Barry
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Thanks so much for taking the time here, the insights are much appreciated. I suspected I'd have to ad hoc compare results if I did repeat …
Answer: Cross-validation with multiple control subgroups in limma
by
Gordon Smyth
52k
limma doesn't do cross-validation or resampling.
Like most classical linear modeling procedures in statistics, limma uses a statistical mod…
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
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Robert Castelo
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3.4k
Hi Hervé, thank you very much for your input into how to properly build and manage TxDb objects. gDNAx has two main inputs, one or more BAM…
Comment: Biostrings: Error writing long reads (>200 kbps) with writeQualityScaledXStringS
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Aidan
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60
Quick update: this is fixed in a branch awaiting PR to Biostrings (https://github.com/Bioconductor/Biostrings/pull/122). Should be in `deve…
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