Showing : BayesPeak • reset
0
votes
0
replies
1.1k
views
[bug] BayesPeak cannot deal with RangedData input
BayesPeak bug
9.3 years ago balwierz ▴ 40
1
vote
3
replies
1.5k
views
Error in bayespeak function importing data
bayespeak
10.3 years ago Reed ▴ 10
8
votes
9
replies
7.3k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq DNAseq ATAC bayespeak narrowpeaks
updated 10.5 years ago by 53k • written 10.5 years ago by ▴ 140
0
votes
8
replies
2.6k
views
chip-seq data
ChIPSeq chipseq BayesPeak ChIPSeq chipseq BayesPeak
13.2 years ago John linux-user ▴ 210
0
votes
1
reply
1.4k
views
Question about ChIPpeakAnno R package
AnnotationData annotate ChIPpeakAnno BayesPeak AnnotationData annotate ChIPpeakAnno
13.3 years ago Julie Zhu ★ 4.3k
0
votes
1
reply
1.3k
views
Upgrade bioconductor to version 2.6
BayesPeak BayesPeak
14.2 years ago Mary Ellen Fitzpatrick ▴ 20
0
votes
7
replies
2.4k
views
error in bayespeak function
ChIPSeq GO BSgenome BSgenome chipseq BayesPeak ChIPSeq GO BSgenome BSgenome chipseq
updated 14.4 years ago by ▴ 130 • written 14.4 years ago by ▴ 810
0
votes
1
reply
1.3k
views
BayesPeak and RangedData obj output
BayesPeak BayesPeak
updated 15.0 years ago by ▴ 130 • written 15.0 years ago by ▴ 30
0
votes
4
replies
2.1k
views
BayesPeak segfault woes
BayesPeak BayesPeak
updated 15.5 years ago by ▴ 130 • written 15.5 years ago by ▴ 270
9 results • Page 1 of 1
Recent ...
Replies
Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
Answer: p.adjust BH Question by Gordon Smyth 53k
Duplicate of https://support.bioconductor.org/p/41077/
Answer: Large logFC but somewhat high FDR by Gordon Smyth 53k
Glad you're getting good use out of the package. The results that you show seem pretty much as one would expect, with nothing surprising. …
Comment: After running samtools, the featureCounts command crashed. by MarcHintz99 • 0
Thanks for shairng https://subread.sourceforge.net/
Comment: Senior Teaching Fellow (MSc Computational Biomedicine) by eja.ger.m • 0
Opportunities like this remind me how digital learning is evolving, much like modern mobile games. With programmes becoming fully online an…
Votes
Comment: upstream git branches of bioc-release
A: p.adjust BH generates duplicate values
Answer: gene Set with high AUC score but no cells assigned to cell type
Answer: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Awards • All
Popular Question to story.benjamin ▴ 20
Popular Question to shepherl 4.2k
Popular Question to Gordon Smyth 53k
Supporter to fabio.marroni • 0
Popular Question to Guido Hooiveld ★ 4.1k
Locations • All
United States, 41 minutes ago
United States, 1 hour ago
USA, Los Angeles, USC, 1 hour ago
WEHI, Melbourne, Australia, 1 hour ago
The city by the bay, 1 hour ago
Traffic: 633 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6