Showing : BayesPeak • reset
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[bug] BayesPeak cannot deal with RangedData input
BayesPeak bug
9.5 years ago balwierz ▴ 40
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Error in bayespeak function importing data
bayespeak
10.5 years ago Reed ▴ 10
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ChIPseq-style peak calling for paired-end sequencing?
Chipseq DNAseq ATAC bayespeak narrowpeaks
updated 10.8 years ago by 53k • written 10.8 years ago by ▴ 140
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chip-seq data
ChIPSeq chipseq BayesPeak ChIPSeq chipseq BayesPeak
13.5 years ago • updated 13.4 years ago John linux-user ▴ 210
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Question about ChIPpeakAnno R package
AnnotationData annotate ChIPpeakAnno BayesPeak AnnotationData annotate ChIPpeakAnno
13.6 years ago Julie Zhu ★ 4.3k
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Upgrade bioconductor to version 2.6
BayesPeak BayesPeak
14.5 years ago Mary Ellen Fitzpatrick ▴ 20
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error in bayespeak function
ChIPSeq GO BSgenome BSgenome chipseq BayesPeak ChIPSeq GO BSgenome BSgenome chipseq
updated 14.6 years ago by ▴ 130 • written 14.6 years ago by ▴ 810
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BayesPeak and RangedData obj output
BayesPeak BayesPeak
updated 15.3 years ago by ▴ 130 • written 15.3 years ago by ▴ 30
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BayesPeak segfault woes
BayesPeak BayesPeak
updated 15.7 years ago by ▴ 130 • written 15.7 years ago by ▴ 270
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Comment: Question on processing compound protein groups in limpa by JKim • 0
Many thanks. I appreciate your advice.
Answer: Question on processing compound protein groups in limpa by Gordon Smyth 53k
Different people have different ways of dealing with compound protein groups. You could just leave them in the analysis, in which case limp…
Answer: Correct usage of limpa for protein input by Gordon Smyth 53k
limpa can work on protein-level quantifications, but they must be intensity-based and must be on the log scale. From what I read (<https://…
Comment: A problem occurs when running the monocle2 by a2a2hset32aa • 0
Troubleshooting monocle2 errors in R 4.5.1 often points to package incompatibilities, particularly with newer versions of igraph. For resea…
Comment: Deadline Extended: EuroBioC2026 Call for Abstracts by a2a2hset32aa • 0
Attending EuroBioC2026 is an excellent way for researchers to explore the intersection of technology and biology. For those seeking high qu…
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Answer: Question on processing compound protein groups in limpa
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
Answer: Correct usage of limpa for protein input
A: Interpretaion of dendrogram height in WGCNA?
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