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bayespeak
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[bug] BayesPeak cannot deal with RangedData input
BayesPeak
bug
8.1 years ago
balwierz
▴ 40
1
vote
3
replies
1.2k
views
Error in bayespeak function importing data
bayespeak
9.1 years ago
Reed
▴ 10
8
votes
9
replies
6.4k
views
ChIPseq-style peak calling for paired-end sequencing?
Chipseq
DNAseq
ATAC
bayespeak
narrowpeaks
updated 9.3 years ago by
Gordon Smyth
51k • written 9.3 years ago by
samuel collombet
▴ 140
0
votes
8
replies
2.1k
views
chip-seq data
ChIPSeq
chipseq
BayesPeak
ChIPSeq
chipseq
BayesPeak
12.0 years ago
John linux-user
▴ 210
0
votes
1
reply
1.2k
views
Question about ChIPpeakAnno R package
AnnotationData
annotate
ChIPpeakAnno
BayesPeak
AnnotationData
annotate
ChIPpeakAnno
12.1 years ago
Julie Zhu
★ 4.3k
0
votes
1
reply
1.0k
views
Upgrade bioconductor to version 2.6
BayesPeak
BayesPeak
13.0 years ago
Mary Ellen Fitzpatrick
▴ 20
0
votes
7
replies
2.0k
views
error in bayespeak function
ChIPSeq
GO
BSgenome
BSgenome
chipseq
BayesPeak
ChIPSeq
GO
BSgenome
BSgenome
chipseq
updated 13.2 years ago by
Jonathan Cairns
▴ 130 • written 13.2 years ago by
Andreia Fonseca
▴ 810
0
votes
1
reply
1.1k
views
BayesPeak and RangedData obj output
BayesPeak
BayesPeak
updated 13.8 years ago by
Jonathan Cairns
▴ 130 • written 13.8 years ago by
Binbin Liu
▴ 30
0
votes
4
replies
1.7k
views
BayesPeak segfault woes
BayesPeak
BayesPeak
updated 14.3 years ago by
Jonathan Cairns
▴ 130 • written 14.3 years ago by
Tim Rayner
▴ 270
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Comment: AffylmGUI does not start wit R 4.4.1
by
Gordon Smyth
51k
affylmGUI passes all checks for all platforms, including Mac OS and arm64, for Bioconductor 3.20, so I assume it must work on a Mac: htt…
Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
by
semra
• 0
install(Biostrings, force = TRUE) Error in install(Biostrings, force = TRUE) : install fonksiyonu bulunamadı > library(Biostrings) Erro…
Comment: AffylmGUI does not start wit R 4.4.1
by
richardallenfriedmanbrooklyn
▴ 20
Dear List, AffylmGUI works fine with R 4.4.1 on Windows. However most of my students have macs. I have installed BWidget and Tktable in the…
Answer: PCA analysis RNA-Seq QC looks strange?
by
swbarnes2
★ 1.4k
In my experience, when the first PC is 91% of the difference, its because you are looking at two different tissues. Check to see what gene…
Comment: ı cant install clusterprofiler on my Ubuntu 20.04.6 LTS
by
James W. MacDonald
67k
What is the output from ``` install("Biostrings, force = TRUE) library(Biostrings) ```
Votes
Save the Date for EuroBioC2025 in Barcelona!
Time course experiment using limma
DEXseq: How to do differential exon usage of genes with overlapping exons
A: Moderated F-test followed by moderated t-test in limma
Answer: [DESeq2] Normalization of External Test Dataset for Machine Learning (ML) Applic
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▴ 380
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