Showing : BiocWorkflowTools • reset
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Export sample data to excel after taxonamy assignment
BiocWorkflowTools
3.9 years ago c.poulton • 0
0
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0
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742
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Author footnotes in BiocWorkflowTools::f1000_article template
BiocWorkflowTools rmarkdown
4.5 years ago helucro ▴ 70
2
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6
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1.2k
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Multiple problems with BiocWorkflowTools
BiocWorkflowTools
updated 4.7 years ago by ★ 6.6k • written 4.7 years ago by ▴ 160
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4
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1.7k
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Does BiocWorkflowTools package generate F1000Reseach/Bioconductor-stype PDF at once?
workflows biocworkflowtools bioconductor
6.5 years ago Koki ▴ 10
3
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1
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800
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LaTeX Error with BiocWorkflowTools
biocworkflowtools
updated 6.6 years ago by ★ 6.6k • written 6.6 years ago by ▴ 20
3
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2
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1.9k
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Issue with pandoc-citeproc when rendering the f1000 article Rmd file from BiocWorkFlowTools
BiocWorkflowTools rmarkdown
updated 7.4 years ago by ▴ 750 • written 7.4 years ago by ★ 1.1k
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Comment: Identical samples after deseq2 batch effect removal by Michael Love 42k
Oh, i didn't realize there is another method in the mix here. I would not necessarily trust this "batch correction" method, and suspect o…
Comment: Identifying potentially associated gene set to drug response using GSVA by Kent • 0
Hi @robertc thanks for the reply. I should have explained to you the context first. I am testing over a hundred drugs on patient samples (s…
Answer: BiocNeighbours Utility for k-Nearest Neighbour Classification by James W. MacDonald 67k
You can easily answer this question yourself. ``` > library(BiocPkgTools) Loading required package: htmlwidgets > depdf <- buildPkgDe…
Answer: HilBertVis install error by James W. MacDonald 67k
It appears you have compiler flags set that preclude you from compiling (-Werror=format-security). If I install `HilbertVis` on my work box…
Comment: Identical samples after deseq2 batch effect removal by maripane • 0
Thanks Michael for quick reply. Actually, I also questioned this but later i saw this issue happens within another cluster and different c…
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A: TopGO: How to retrieve the gene list related to a GO ID ?
A: Error in DESeqDataSet : some values in assay are not integers
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
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