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BiocWorkflowTools
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Export sample data to excel after taxonamy assignment
BiocWorkflowTools
3.4 years ago
c.poulton
• 0
0
votes
0
replies
633
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Author footnotes in BiocWorkflowTools::f1000_article template
BiocWorkflowTools
rmarkdown
4.0 years ago
helucro
▴ 70
2
votes
6
replies
993
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Multiple problems with BiocWorkflowTools
BiocWorkflowTools
updated 4.2 years ago by
Mike Smith
★ 6.5k • written 4.2 years ago by
alan.ocallaghan
▴ 160
1
vote
4
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1.5k
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Does BiocWorkflowTools package generate F1000Reseach/Bioconductor-stype PDF at once?
workflows
biocworkflowtools
bioconductor
6.0 years ago
Koki
▴ 10
3
votes
1
reply
681
views
LaTeX Error with BiocWorkflowTools
biocworkflowtools
updated 6.1 years ago by
Mike Smith
★ 6.5k • written 6.1 years ago by
shbrief
▴ 20
3
votes
2
replies
1.7k
views
Issue with pandoc-citeproc when rendering the f1000 article Rmd file from BiocWorkFlowTools
BiocWorkflowTools
rmarkdown
updated 6.9 years ago by
Andrzej Oleś
▴ 750 • written 6.9 years ago by
Leonardo Collado Torres
★ 1.1k
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Comment: conumee with Infinium MethylationEPIC v2.0
by
Maximus
• 0
Hi Sole, If there is a combined mixture of MSet of 450K, EPIC and EPICv2, how should I create an annotation object? I tried to create anno…
Comment: Volcano plot of scRNA-seq data not "centered"
by
tjl
• 0
Thank you both. The code is below, simplified a bit for simplicity. ATpoint, your suggestion re: the top 20% of genes by baseMean makes me …
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
Wait a minute. The `oligo` package is *supposed to* be using `zlibbioc`, but apparently it is not. I get the same thing as you do, where it…
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
There is the `zlibbioc` package that provides the headers for zlib 1.2.5, that I think you should be able to use, although that would requi…
Answer: GSVA function
by
Robert Castelo
★ 3.3k
Hi, We recommend to input normalized expression values in logarithmic scale to GSVA. We also recommend to use the latest release of the …
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Answer: How to run allelic imbalance in apeglm
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Answer: Documenting resources in an `ExperimentHub` package?
Answer: Not able to install any Bioconductor 3.18 package [unable to access index]
Seurat/DESeq2 - single cell RNA-seq differential expression
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