Bioconductor CLANG

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CLANG DESeq2

16 months ago lokapal • 0

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CoGAPS clang

23 months ago • updated 21 months ago MayerAdam • 0

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Comment: Allele frequencies for ALL alleles of one SNP ? by Abiologist • 0

many thanks - yes I probably would want the new "dbGaP_PopFreq" source.

Comment: Handling Epic Array Data by James W. MacDonald 67k

You can use `model.matrix` to generate the design matrix. See examples in the 'limma User's Guide' or the vignette for the `DMRcate` packag…

Comment: How to get The evolutionary conservation scores for lncRNAs by the phastCons100w by rania.alanany • 0

Thank you for the detailed explanation

Comment: Is it recommended to analyze different tissues together when using edgeR by Lars Roed • 0

Thank you, I'm guessing I could plot the average logCPMs of the tissues against each other to determine if the expression differs, is it po…

Answer: Is it recommended to analyze different tissues together when using edgeR by Gordon Smyth 51k

It is a matter of judgement. If the regions are very similar in expression and the samples have been collected and processed at the same ti…

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Answer: Using Affymetrix Custom Array

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Scholar to James W. MacDonald 67k