Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Dese
•
reset
4
votes
4
replies
1.2k
views
Adding cell population estimates as a covariate in DESeq2 differential gene expression analysis
DESeq2
Dese
DifferentialRegulation
differe
updated 10 weeks ago by
feather-W
• 0 • written 13 months ago by
Bernardo
▴ 10
0
votes
2
replies
1.0k
views
Handling NA's in Deseq2
Dese
DESeq2
12 months ago • updated 11 months ago
Asger Mølgaard
• 0
0
votes
5
replies
853
views
DESeq2 analysis
DESe
DESeq2
10 months ago
Adèle
• 0
0
votes
1
reply
195
views
collapseReplicates dimension error
DESeq2
Dese
updated 8 weeks ago by
Michael Love
42k • written 9 weeks ago by
Léa
• 0
0
votes
2
replies
450
views
Linear Model Fitting and Colinearity
dese
DESeq2
5 months ago
Hugo
• 0
0
votes
2
replies
275
views
DESeq2 Results in Different Pvalue & Log2FC using the same code and data
DESeq2
dese
updated 3 months ago by
ATpoint
★ 4.2k • written 3 months ago by
Xu
• 0
0
votes
2
replies
303
views
Cross-species analysis using DESeq2 - size factor computation
dese
DESeq2
4 months ago • updated 3 months ago
pl23
• 0
7 results • Page
1 of 1
Recent ...
Replies
Comment: Why is longestConsecutive() depreceated in version 2.72 (BioC version 3.19)?
by
ATpoint
★ 4.2k
I don't have an answer to the "why" but maybe a simple reimplemention will do: ```r seqs <- c("ATCATCGTATCAAAGTC", "AAAACGTATCAAAGTC", "TG…
Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
by
Guido Hooiveld
★ 4.0k
After checking `?DESeqDataSetFromMatrix` note this information: arguments provided to SummarizedExperiment including rowRanges and met…
Answer: Error in gseDO function
by
Guido Hooiveld
★ 4.0k
Yes, you are missing something. :-) For a GSEA you will need to use as input all genes that you are analyzing; these genes should be ran…
Comment: GSVA function
by
Robert Castelo
★ 3.3k
No, negative values may occur after log transformation when the `log(x)` is taken from a positive number `x with 0 < x < 1`, and therefore …
Comment: conumee with Infinium MethylationEPIC v2.0
by
sgomez
• 0
Hi Max, Could you try this? https://support.bioconductor.org/p/9136138/#9136840
Votes
A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
A: DiffBind Batch Effect
A: DiffBind Batch Effect
C: DiffBind Batch Effect
Awards
• All
Popular Question
to
Robert Castelo
★ 3.3k
Popular Question
to
kevin.rue
▴ 350
Popular Question
to
Wei Shi
★ 3.6k
Popular Question
to
Gordon Smyth
50k
Popular Question
to
jovel_juan
▴ 30
Locations
• All
Melbourne, Australia,
2 minutes ago
The city by the bay,
27 minutes ago
WEHI, Melbourne, Australia,
1 hour ago
UPF, Barcelona, Spain,
1 hour ago
Germany,
1 hour ago
Traffic: 445 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6