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DiFFBind
•
reset
0
votes
0
replies
65
views
need help with Diffbind multiple groups
DiffBind
ChIPSeqData
6 days ago
Dinesh
• 0
0
votes
0
replies
105
views
dba.plotProfile() plotting and interpretation
DiffBind
10 days ago
Henry
▴ 10
0
votes
0
replies
79
views
DiffBind: no peaks in DBA object
DiffBind
macs2
chipseq
11 days ago
yvonneh
• 0
0
votes
0
replies
74
views
How to create consensus peak sets for each group to use in DiffBind?
DiffBind
11 days ago
Ian D.
▴ 70
0
votes
4
replies
327
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More regions in union when increasing DBA$config$mergeOverlap
DiffBind
updated 1 day ago by
Ziliang
• 0 • written 12 days ago by
Ian D.
▴ 70
1
vote
1
reply
142
views
Fold change calculation in Diffbind vs. DESEQ2?
DiffBind
ChIPSeqData
DESeq2
updated 13 days ago by
Michael Love
42k • written 13 days ago by
marcusn
• 0
0
votes
1
reply
156
views
ATACseq merge peaks
DiffBind
updated 17 days ago by
ATpoint
★ 4.1k • written 19 days ago by
Shloka
• 0
0
votes
4
replies
248
views
Differential peaks that were not identified in diffbind were identified in diseq2
DiffBind
DESeq2
ATACSeq
26 days ago • updated 23 days ago
lonn
• 0
0
votes
0
replies
101
views
Diffbind Error in socketConnection
DiffBind
Errorinsocketconnection
SpikeIn
28 days ago
Virangika
• 0
2
votes
2
replies
179
views
[DiffBind] Obtaining normalization factors
DiffBind
4 weeks ago • updated 27 days ago
Henry
▴ 10
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Comment: Importing a GraphNEL into Cytoscape with RCy3 with error: "Error in cyrestPUT(pa
by
alex.pico
▴ 20
Hi Matthew. Happy to help. The error message you are getting is indeed not very helpful. It's just saying that the CyREST return obj "res" …
Comment: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
by
bandconductor
• 0
thanks! you have saved me so much time
Comment: Problem finding certain variables when importing a public database GSE73103
by
Guido Hooiveld
★ 3.9k
FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…
Votes
Answer: ChipQC 'names' attribute [9] must be the same length as the vector [2]'
ChipQC 'names' attribute [9] must be the same length as the vector [2]'
A: DEXSeq time course design
using variable in design formula
differential expression for Single-cell RNAseq data using edgeR
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