Showing : SpikeIn • reset
4
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9
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Using edgeR and a spike-in to calculate absolute abundance
edgeR SpikeIn RNASeq
4 months ago robert.chen • 0
1
vote
8
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475
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Spike-in normalization in EdgeR
CUTandRUN edgeR Normalization SpikeIn ChIPSeq
8 months ago Hesh • 0
2 results • Page 1 of 1
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Comment: edgeR by Gitanjali • 0
Thanks @gordonsmyth , that helped. Also how do I put 24h at the end? I want to plot the observed and fitted values for each gene across tim…
Comment: ChIPseeker genomicAnnotationPriority by hqlkjx • 0
I am meeting the same problem
Comment: cannot install edgeR on M1 Mac by Gordon Smyth 43k
OK, I understand now the issue is that you are running R compiled for the Mac M1 ARM-based processor but Bioconductor doesn't provide binar…
Comment: How can I use geom_label_repel with EnhancedVolcano? by Kevin Blighe 3.2k
Thanks! I think that I know what you want to do, but, unfortunately, that level of customisation is not possible with *EnhancedVolcano* alo…
Comment: Split mzID file with mzID() function by Brem • 0
Thank you, I've edited the post with the correct package, mzID.
Votes
ChIPseeker genomicAnnotationPriority
Answer: barcodeRanks unusual warning "In smooth.spline(x[new.keep], y[new.keep], df = df
Answer: barcodeRanks unusual warning "In smooth.spline(x[new.keep], y[new.keep], df = df
cannot install edgeR on M1 Mac
Increasing rlm iterations for convergence in limma's normalizeRobustSpline
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