Showing : ChIPSeqData • reset
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Chip Seq Analysis of RNA Polymerase 2
ChIPseeker ChIPSeqData ChIPSeq Bioconductor
written 2 days ago by • 0
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405
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ChIP peaks comparison
ChIPSeqData genomes ChIPSeq
15 months ago user_bioinfo • 0
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624
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hichip fragments extraction chip seq
ChIPSeqData interact GenomicRanges HiC
18 months ago user_bioinfo • 0
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565
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need help with Diffbind multiple groups
DiffBind ChIPSeqData
21 months ago Dinesh • 0
3
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1000
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Fold change calculation in Diffbind vs. DESEQ2?
DiffBind ChIPSeqData DESeq2
updated 21 months ago by 43k • written 21 months ago by ▴ 10
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5.8k
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bwa mem2 index genome - chipseq analysis
Genome bwamem ChIPSeqData index
updated 3.0 years ago by ★ 5.0k • written 3.0 years ago by • 0
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2
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1.6k
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New to ChipSeq getting 0 peaks using dba()
ChipSeq ChIPSeqData chipseqDB
3.2 years ago stacy.genovese • 0
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3
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1.7k
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CountOverlap
GeneExpression ChIPSeqData
updated 3.4 years ago by 68k • written 3.4 years ago by ▴ 20
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DiffBind bUseSummarizeOverlaps error - the rownames and colnames of the supplied assay(s) must be NULL or identical to those of the SummarizedExper…
DiffBind ChIPSeqData
updated 3.6 years ago by ▴ 10 • written 4.2 years ago by • 0
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909
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ChIPpeakAnno: No seqlevelsStyle compatible entry
ChIPSeqData
4.2 years ago tom.dean • 0
5
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3
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3.0k
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importing BED with non-integer values
ChIPseeker ChIPSeqData
updated 5.2 years ago by 68k • written 5.2 years ago by ▴ 10
11 results • Page 1 of 1
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Comment: Postdoctoral Fellow (Computational Biology / Bioinformatics) - Neuroepigenetics by mudasarnaeem2020 • 0
Promoting UDISE+ Features on Social Media to Increase Awareness https://udisseplus.com/[enter link description here][1] [1]: https://ud…
Comment: DiffBind plot.profile error by a2sahaaaq2c • 0
To resolve technical errors like installation failures or login issues, first ensure your device allows in the security settings and that…
Comment: soGGi error by shepherl 4.3k
We have tried to contact the soGGi maintainer to have them update the package to the newer version of gglot2 but they have so far been unre…
Comment: using limma trend workflow in CAMERA by Gordon Smyth 53k
No, `trend.var=TRUE` and `trend=TRUE` are not needed in any voom pipeline, because the trend is already incorporated into the voom weights.
Comment: Questions about bacon QC and correction on EWAS results by Tikaaa2sahaaaq2c • 0
In the world of mobile games, the 88ef game download has gained traction for its performance driven design [free download][1], similar to …
Votes
Answer: DiffBind differential analysis
Answer: Limma-voom sample weights and impact on DEG numbers
C: Why limma, edgeR, and DESeq did not implement fold change moderation first?
Comment: using limma trend workflow in CAMERA
C: z-score with DESeq2?
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