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DiffHic
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scaling loess curves
HiTC
gothic
diffhic
HiC
10.4 years ago
Bogdan
▴ 670
0
votes
2
replies
2.0k
views
diffHiC read loss when loading BAM to HDF
diffhic
updated 10.5 years ago by
Aaron Lun
★ 29k • written 10.5 years ago by
koustav.pal
• 0
0
votes
1
reply
1.3k
views
DiffHic-package. Identify the name of bins with over or underrepresentation of reads mapped -marginCounts- . Extracting data from DIList objects
MarginCounts
squareCounts
DIList
DiffHic
updated 10.5 years ago by
Aaron Lun
★ 29k • written 10.5 years ago by
rulicosentino
• 0
2
votes
1
reply
1.6k
views
How to read in bam file that is output from presplit_map.py using the GenomicAlignment package
diffhic
updated 10.5 years ago by
Aaron Lun
★ 29k • written 10.5 years ago by
mrk.carty
▴ 30
2
votes
4
replies
2.3k
views
diffHic-package_PreparePairs-function-error:"missing chromosomes in cut site list"
diffHic
PreparePairs
Hi-c
cutGenome
10.6 years ago
rulicosentino
• 0
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I tried following the code, but it seems to have some kind of error that I can't find. Sorry, I'm a beginner. [fnf][1] [1]: https://fnf…
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Comment: Confirm that OpenStats will not be archived (pryr dependency)
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Marina
• 0
Thank you!
Comment: AnnotationForge makeOrgPackage rsqlite_send_query error
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ansley.r.burtch
• 0
Hi! I am sure you are well into your career now and haven't worked on this for a while, but I wanted to let you know this is still helping …
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A: DESeq2 - VST eliminates zero values
Comment: Normalise to a housekeeping gene in DESEq2
Comment: limpa analysis advice
C: AnnotationForge makeOrgPackage rsqlite_send_query error
Answer: Limpa Pipeline Order
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