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HiTC
•
reset
0
votes
3
replies
986
views
HiTC import is throwing error
HiTC
importC
sparseMatrix
2.2 years ago • updated 2.1 years ago
shikha
• 0
0
votes
6
replies
1.0k
views
HiTC problem exporting to my5C
HiTC
HiC-Pro
4.4 years ago
sergio.espeso-gil
• 0
1
vote
3
replies
1.4k
views
A/B compartments computation: control settings
HiTC
updated 3.1 years ago by
ahmed.abbaselmahdi
• 0 • written 5.1 years ago by
Konstantin Okonechnikov
▴ 40
1
vote
5
replies
1.6k
views
visualize Hi-C .cool file in R
Hi-C
HiTC
6.0 years ago
ta_awwad
▴ 10
0
votes
2
replies
1.2k
views
Gene Density computation in pca.hic
HiTC
6.1 years ago
cath
▴ 30
0
votes
5
replies
1.7k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.4 years ago by
Nicolas Servant
▴ 260 • written 6.4 years ago by
René Wiegandt
• 0
3
votes
5
replies
1.5k
views
normLGF yields non-symetric matrices
HiTC
updated 7.3 years ago by
Nicolas Servant
▴ 260 • written 7.3 years ago by
enrique.vidal
▴ 10
1
vote
10
replies
2.3k
views
FourC object from scratch
hi-c
HiTC
fourcseq
8.8 years ago • updated 8.6 years ago
Nicolas Servant
▴ 260
0
votes
0
replies
1.2k
views
FourC object from scratch
hic-c
hitc
fourcseq
8.8 years ago
Nicolas Servant
▴ 260
4
votes
20
replies
2.6k
views
scaling loess curves
HiTC
gothic
diffhic
HiC
8.9 years ago
Bogdan
▴ 670
0
votes
0
replies
939
views
normalization method for 5C
HiTC
8.9 years ago
Bogdan
▴ 670
0
votes
0
replies
1.1k
views
Problem importing 5C data
importing
HiTC
9.3 years ago
gugpuccio
▴ 10
0
votes
1
reply
2.6k
views
biocLite("TxDb.Hsapiens.UCSC.hg19.knownGene") fails
BSgenome
hexbin
BSgenome
IRanges
genomeIntervals
GenomicRanges
girafe
Rsamtools
HiTC
HiTC
updated 11.4 years ago by
Dan Tenenbaum
★ 8.2k • written 11.4 years ago by
Wim Kreinen
▴ 100
0
votes
4
replies
1.4k
views
genome_intervals and GRange objects/HiTC package
Annotation
HiTC
Annotation
HiTC
updated 11.5 years ago by
Valerie Obenchain
★ 6.8k • written 11.5 years ago by
Hermann Norpois
▴ 170
0
votes
1
reply
1.3k
views
HiTC: problem with HTClist
HiTC
HiTC
updated 11.5 years ago by
Martin Morgan
25k • written 11.5 years ago by
Hermann Norpois
▴ 170
15 results • Page
1 of 1
Recent ...
Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
Awards
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Lluís Revilla Sancho
▴ 730
Popular Question
to
maltethodberg
▴ 180
Scholar
to
Michael Love
42k
Popular Question
to
Leonardo Collado Torres
★ 1.1k
Scholar
to
Gordon Smyth
51k
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