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Ensemblplants
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external_gene_id attribute removed from new biomaRt version
biomaRt
Ensembl
Ensemblplants
4.8 years ago
Didi
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Comment: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
by
ATpoint
★ 4.1k
Ask yourself the question how a gene that is exactly the same everywhere adds anything to any analysis. Heatmaps usually take DEGs to infer…
Comment: Extremely small p-values using Limma for proteomic data
by
ATpoint
★ 4.1k
I'd argue that most users, especially the general reader of a paper is interested in a visual representation of the data **and** applied cu…
Comment: Extremely small p-values using Limma for proteomic data
by
Robert Castelo
★ 3.3k
I'd also add that plotting adjusted P-values in the y-axis of the volcano plot is not the recommended way to produce a volcano plot. This h…
Comment: Cannot connect to ExperimentHub server
by
Jiayu
• 0
Many thanks and it also resolved the same issue for me!
Comment: Help with running egsea()
by
Chris
• 0
I tried egsea.ma and got this error: gsa = egsea.ma(numeric_matrix, vector_group, probe_annotation, contrasts = contrast_matrix, gs.an…
Votes
Answer: minfi latest update for EPIC V2 chip
A: Error in DESeqDataSet : some values in assay are not integers
Answer: Cannot connect to ExperimentHub server
Answer: confused with tximport counts abundance using salmon input
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call
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