updated 2.1 years ago by
Gordon Smyth
52k
•
written 2.1 years ago by
jeltje.van.baren
•
0
1
vote
3
replies
850
views
Recent ...
Replies
Comment: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
by
Aaron Lun
★
28k
You can examine the structure of a `DelayedMatrix` by calling the `showtree()` function. For example:
```
library(scRNAseq)
X <- fetchData…
Comment: lfcShrink and alpha value
by
cropero
•
0
Thank you so much!
Would that be equivalent to perform `res <- results(dds, contrast = c("conditions", "wild_type_114_2_no_carbon", "wild_t…
Comment: pathview - multiple states
by
Philippine
•
0
Thank you! Here a subset of genes that really works with "ame04145".
data <- data.frame(
EntrezID = c(100577548, 100577764, 406…
Comment: pathview - multiple states
by
Guido Hooiveld
★
4.1k
A quick comment after I copied/pasted your code: when using `geneList1` in the 3rd code chunk I do **not** get a nice plot... I rather got …
Answer: scuttle::perFeatureQCMetrics runs very slow for big scRNA-seq data
by
Adam
•
0
Hi Aaron,
Thanks a lot for your help!
As you mentioned, I checked my data and it is "DelayedMatrix". I don't know the detailed differe…
Votes
Awards
• All
Popular Question to
tombate94
•
0
Popular Question to
Ou, Jianhong
★
1.3k
Popular Question to
mikat
•
0
Popular Question to
joseph.joonsang
•
0
Popular Question to
Hans-Ulrich Klein
▴
330
Locations
• All
WEHI, Melbourne, Australia, 1 minute ago
France, 8 minutes ago
The city by the bay, 8 minutes ago
United Kingdom, 10 minutes ago
India, 1 hour ago
WEHI, Melbourne, Australia, 1 minute ago
France, 8 minutes ago
The city by the bay, 8 minutes ago
United Kingdom, 10 minutes ago
India, 1 hour ago
Traffic: 581 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6