Showing : FRMA • reset
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Seperate quantile normalization but common probe summary by median polish (oligo package)?
Normalization probe oligo frma frmaTools Normalization probe oligo frma frmaTools
13.4 years ago Schott, Johanna ▴ 20
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Seperate quantile normalization but common probe summary by median polish (oligo package)?
Normalization probe frma frmaTools Normalization probe frma frmaTools
updated 13.4 years ago by 68k • written 13.4 years ago by ★ 13k
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errors in FRMA
Annotation hgu133a2 hgu133a frma Annotation hgu133a2 hgu133a frma
updated 13.6 years ago by ▴ 830 • written 13.6 years ago by ▴ 510
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FrozenRMA how to
Microarray Network hgu133plus2 Biobase PROcess KEGGSOAP beadarray EBImage edgeR frma
updated 13.8 years ago by ▴ 830 • written 13.8 years ago by ▴ 20
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problem with frma on U133AAofAv2 platform
probe frma probe frma
updated 14.1 years ago by ▴ 830 • written 14.1 years ago by ▴ 20
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1.3k
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problem with frma( )
convert frma convert frma
updated 14.2 years ago by ▴ 830 • written 14.2 years ago by ▴ 20
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1.5k
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[XPS] integrating data processed outside of XPS into the tree
PROcess xps frma PROcess xps frma
updated 14.2 years ago by ★ 3.9k • written 14.2 years ago by ▴ 50
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fRMA error when using exprs()
Normalization frma Normalization frma
14.2 years ago SylvainBrohée ▴ 50
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frma vectors for mouse 430 2.0
frma frma
updated 14.5 years ago by ▴ 830 • written 14.5 years ago by ▴ 170
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GCRMA: feature request
GO Regression probe gcrma frma GO Regression probe gcrma frma
updated 14.9 years ago by ▴ 250 • written 14.9 years ago by ★ 4.1k
60 results • Page 2 of 2
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Answer: NUPOP usage by shepherl 4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker? by fnfgame • 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes by Erik Wright ▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Answer: DESeq(dds, parallel=TRUE) wrong args for environment subassignment by Michael Love 43k
The DESeq2 error makes sense, as we've talked about, given that the simple `bplapply` isn't working in your setup. Maybe give the traceb…
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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