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GENESIS
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16
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Conditional analysis
GENESIS
5 hours ago
SuperDad
• 0
0
votes
1
reply
235
views
GENESIS: error in crossprod
GENESIS
3 months ago
Stephanie M. Gogarten
▴ 870
0
votes
2
replies
435
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GENESIS: Can not use GdsGenotypeReader to read a gds file
GENESIS
GWASTools
GDSfile
updated 5 months ago by
Stephanie M. Gogarten
▴ 870 • written 5 months ago by
Mindy wang
• 0
1
vote
1
reply
474
views
HOW to FIX - PCAir excludes all my SNPs because there is no chromosome information
GENESIS
autosome-only=FALSE?
PCAir
updated 6 months ago by
James W. MacDonald
66k • written 6 months ago by
gabry.scata
• 0
0
votes
2
replies
421
views
SKAT-O method using GENESIS, question about range iterator using SeqVarWindowIterator
GENESIS
SeqVarTools
updated 6 months ago by
Stephanie M. Gogarten
▴ 870 • written 6 months ago by
pjuge
• 0
0
votes
0
replies
298
views
How many ancestries to send in admixMap() when doing a two-way analysis?
GENESIS
admixMap
7 months ago
mailtoshivam13
• 0
2
votes
5
replies
798
views
assocTestSingle output with GxE
GENESIS
updated 10 months ago by
Stephanie M. Gogarten
▴ 870 • written 11 months ago by
SuperDad
• 0
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Answer: recount3 problem downloading data from source sra
by
Leonardo Collado Torres
★ 1.0k
Hi, I wasn't able to reproduce the issue on both bioc 3.19 (current release version) and 3.18 (closer to your session info). My guess is…
Answer: Running ENmix with mouse methylation manifest: readidat error - Error in readman
by
minardsmitha
▴ 10
Well it turns out there is a typo in the manifest file name. This particular issue is resolved by correcting the typo. A new error now …
Answer: Documenting resources in an `ExperimentHub` package?
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66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
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3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Comment: How to arrange multiple plots into one page in NOISeq?
by
baptiste.bidon
• 0
After facing the same problem, I realise that you can direct your plot in the matrix with the *par()* option `par(..., mfg = c(1,2))`. If i…
Votes
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
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